Flavobacterium bizetiae: L0669_13940
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Entry
L0669_13940 CDS
T08699
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L0669_13940 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_13940 (priA)
Enzymes [BR:
fbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0669_13940 (priA)
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L0669_13940 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Cas3-like_C_2
TrmB
nSTAND3
PyrI_C
AAA_30
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
UTN02421
LinkDB
All DBs
Position
3203207..3205657
Genome browser
AA seq
816 aa
AA seq
DB search
MFFVEVVLPLSLAKTFTYRISEAEFHFIKKGMRVAVPFGKSKIYTALVIDIHQNEPSLYD
AKEIHQILDERPIATEIQIKHWLWVATYYMCGIGDVYRGAFPSGLLLESETVVSHKPDTL
VNDSELSDDEFLIYEALQHQSSLKVGEIASILNKKNIFPILQKLMTKDIIVLEEEMKESY
KPKLVRYVKLHAKYESDNGLNELLEVLKSANKQKEIVLAYFQLMASEKKPITVKKLVEVS
DSTSATVKALIDKEIFEEYLLQHDRISFSGQASEKQLLLSEAQNSAFESIKTSFLDKEVC
LLHGVTSSGKTEIYIKLIEEYLVTGRQVLYLLPEIALTTQLVSRLRLHFGDKVAVFHSKY
SNNERVEVWRQTLENAEKAQIVIGARSALFLPFNNLGLLIVDEEHEQTFKQTDPAPRYHA
RDAAIVLANFHNAKVLLGSATPSIETYFNTQTDKYGLVTLSERYNNVRMPEILLVDLKDK
HFRKRMTGHFSDILIEEIAEALSLGEQVILFQNRRGYSPIIECMTCGHVPHCQQCDVSLT
FHKHKNQLRCHYCGYAIAKPTHCHSCSSIDLTTKGFGTEQIEQELVSLFPKAKTGRMDQD
TTRGKFGFEKIIDSFKNREIDILVGTQMLAKGLDFDNVSLVGIMNADNMLHHPDFRAFER
SFQMMTQVAGRAGRSEKQGKVVIQTYNPNHNTIQQVTNHNYIGMYKEQLYDRQIYKYPPY
FRIIKLTLKHREFDKLKEGSMWLYQVLSQNLGIPVLGPEEPAISRIRNEYIRTILIKIPQ
NMPLGGTKKTIQKMLNSFEAVAQYRAIKVIANVDFY
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtcgaagttgttttaccgctttctttagccaaaacctttacttatcgtatt
tctgaggccgaatttcatttcataaaaaagggaatgcgcgttgctgtaccttttggtaaa
agcaaaatatatacggcgctggtaattgatattcatcaaaacgaaccaagtttgtatgat
gctaaagaaattcatcaaatattagacgaaagacctattgcaaccgaaattcagattaaa
cactggctttgggtggctacttattatatgtgcggaattggcgatgtatatcgcggagct
tttcctagcggattattgcttgaaagtgaaactgtagtttcgcataaaccggatacgttg
gtaaatgattctgaactttctgatgacgagtttttaatttacgaagcattacaacatcag
agttcgcttaaggttggggagattgcttcaattttaaacaaaaaaaatatttttccgatt
cttcaaaaattaatgacaaaggacattattgttttagaagaagaaatgaaagaaagttat
aagccaaaattggttcggtacgtaaaactacatgccaaatacgaatctgataatggttta
aatgaactattagaagttttaaaaagcgctaataaacagaaggaaattgttctggcttat
tttcaattaatggcttctgaaaagaaacctattacggtaaaaaagctggttgaggtttcg
gattcaacttctgctacggtaaaggctttaatcgataaagaaattttcgaagaatatctt
ttgcagcacgatcgtatttcgttttccggacaagcatctgaaaagcaattattgttgagt
gaagctcagaatagtgcttttgaatcgattaaaactagttttttagataaagaagtttgc
ttacttcacggtgttacatccagcggaaaaacagaaatttatatcaagttgattgaagag
tatttggtaacaggaaggcaggttttgtatttactgccagaaattgcgcttacgactcaa
ttagtatcgcgtttacgacttcattttggagataaagttgctgtttttcattctaaatac
agcaataacgaaagggttgaggtttggaggcaaacgcttgaaaatgctgaaaaagctcaa
atcgtaataggagcaaggtcagctttgtttcttccttttaataatttaggattattgatt
gttgatgaagaacatgagcaaacttttaagcaaactgatccggcaccaagatatcacgcc
agagatgcggcgattgttttggctaattttcataatgcaaaagtgcttttaggatcggcg
acaccaagtatcgaaacgtattttaatacccaaacagacaaatacggtttggttacgctg
tctgaacgttataataatgttcgaatgcctgagattcttttagtcgatttaaaagacaaa
catttcagaaaacgaatgacgggtcattttagcgatattttaatagaagaaattgcagaa
gcgttgtctttaggtgaacaagtgattttgtttcaaaacagacgtggatattctcctata
atagaatgtatgacttgcgggcacgttccgcattgtcagcaatgtgatgtgagtttgact
tttcataaacataaaaatcaattgcgttgtcattattgcggatatgcaatcgcaaaacca
acgcattgccatagttgttcgagtattgacttaactacaaaaggttttggtacagagcaa
atcgagcaggaattggtatcacttttcccaaaagccaaaaccggcagaatggatcaggat
acaacccgcggaaagtttggtttcgaaaagataatagattcgtttaaaaatcgtgaaata
gatattttggtaggaacacaaatgcttgccaaaggtttagattttgataacgtaagtctg
gtaggaattatgaatgcggataatatgctgcatcatcccgattttagggcttttgaacga
agttttcaaatgatgacacaagtggcaggaagggccggaagatcagaaaaacaaggaaaa
gtggttatacaaacttataatcctaatcataatacaattcagcaagttacaaaccataat
tatataggtatgtataaagagcaattgtatgatcgccaaatttataagtacccaccttat
ttcaggattattaaactaacgctgaaacatcgtgagtttgataaattgaaggaaggttcg
atgtggctgtatcaggttttgagtcagaatttgggtattcctgttttaggacctgaggaa
ccggcgataagcagaatcagaaatgagtacatcagaacgatcctgattaagattcctcag
aatatgcctttgggcggaacaaaaaaaactattcagaaaatgttgaatagttttgaggct
gttgctcagtacagagctataaaagtgattgccaacgtcgatttttattaa
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