Flavobacterium bizetiae: L0669_14100
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Entry
L0669_14100 CDS
T08699
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03030
DNA replication
fbi03430
Mismatch repair
fbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0669_14100
03430 Mismatch repair
L0669_14100
03440 Homologous recombination
L0669_14100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbi03032
]
L0669_14100
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_14100
Enzymes [BR:
fbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0669_14100
DNA replication proteins [BR:
fbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0669_14100
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0669_14100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
HK_sensor_dom_bact
T5orf172
Motif
Other DBs
NCBI-ProteinID:
UTN02453
LinkDB
All DBs
Position
complement(3247368..3248729)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVIDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFFEVAKRIIEITSDCIIVAHNASFDYRILRTEFRRLGYDFEARTLCTVELAKKL
IPEQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDLEKTIVKDFIKLEVEK
GIAPKFLDLLSQMPTKTGVYYIYNEGGTLIYIGKSQNIKKRVNQHFTGITTKSKKIQAEV
FTITYDETGSELIALLKESQEIKINRPRYNRSQRKTNFPYALYVEKDANGYLNLKLEKAD
GRKKEITSYASLQEGKNALFKFTTKYHLCQKLTGLYVTKKECFQYKIKECDGACIGEVTP
EIYNARVQQFIAENSFENKSMILIDRGRNVNERSAILIENGIYQGYAFYDLNYQINNVEI
LKNILIPMQHNRDVKNIIQNYIRKSKSLKILNF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactagacatagaaaccactggaggccagtttaacgaagaaggaattacc
gaaatcgccatttataaatttgatggccatgaagtaatcgaccaattcattagccttgtt
aatcctgaaatcccgattcagccttttgtggtgaaattaaccgggattaataatgctatg
ttgcgttctgcacctaagttttttgaagttgccaaacgaatcatcgaaattacttccgat
tgtattatcgtagcgcacaacgcctctttcgattatagaattttacgtaccgaattcaga
cgtttgggttatgatttcgaagccagaacactttgtacagtagaattagccaaaaaacta
attccagaacaaccttcttatagcttaggaaaactagttcgcgcattgggaattccaatg
gccgacaggcatcgtgccagcggagacgccatggcaacgaccaagttattcaaaatgctt
cttgaaaaagacttagaaaaaacaatcgtaaaagattttataaaactagaagtcgaaaaa
ggaattgcaccaaaatttctcgatcttttatcccaaatgccaaccaaaaccggcgtttat
tatatctataacgaaggcggaactctaatttatattggcaaaagccaaaatatcaaaaaa
agagtcaatcagcattttacaggaattacgaccaaaagcaaaaaaattcaagccgaagtt
ttcaccataacctatgatgaaaccggaagtgaacttattgcattattaaaagaaagtcag
gaaataaaaataaacagacccagatataaccgttcacaacgcaaaaccaattttccatat
gcattatatgtagaaaaagatgctaacggatatttgaatctaaaacttgaaaaggctgac
gggcgtaaaaaagaaattacgtcatacgccagcttacaagaaggtaaaaatgcacttttt
aagttcactacaaaataccatttgtgccaaaagcttacaggattatatgtaactaaaaaa
gaatgttttcaatataaaataaaggaatgcgacggcgcttgtattggcgaagtcactccg
gaaatttacaatgccagagtacagcaatttatagccgaaaacagcttcgaaaataaaagc
atgattcttattgacagaggaagaaatgtaaacgaaagaagcgcgatattgatagaaaac
ggaatttatcaaggatatgccttttacgacctaaactatcaaataaacaatgtcgaaatt
ctaaaaaatattctcattccaatgcaacacaatcgcgatgtaaagaatattatccagaat
tacattcgtaaaagcaaatcgcttaaaatcctaaatttttaa
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