Flavobacterium bizetiae: L0669_16890
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Entry
L0669_16890 CDS
T08699
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0669_16890 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbi03019
]
L0669_16890 (recQ)
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_16890 (recQ)
Enzymes [BR:
fbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0669_16890 (recQ)
Messenger RNA biogenesis [BR:
fbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L0669_16890 (recQ)
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0669_16890 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
GerE
zf-CXXC
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
UTN03002
LinkDB
All DBs
Position
3972367..3974475
Genome browser
AA seq
702 aa
AA seq
DB search
MNSEILHAKLKENFGFEKFRPNQETIINTILSGQDTLAIMPTGGGKSICFQLPALVLPGI
TIVISPLIALMKDQVDSLKTNGINACYINSSQSSEEQQFYIDNLKSNKFKLVYIAPESLS
YLDVVFNELTISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPVLALTATADKATR
TDITKQLNLRNPKTFVASFDRKNLSLEVRPALDRVKQIIDFVENKPNESGIVYCLSRKTT
EELALKLQKNGVKAKAYHAGLENKLRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRWVI
HYNLPKNIEGYYQEIGRAGRDGLSAETILFESYADVIQLQKFASEGLNSDVQLAKLERMK
QYADALSCRRKILLSYFGELVKENCGNCDICKNPPTFFDGTILAQKALSAISRLQESEPL
AVIVDFLRGSRNAYIYEKNYQELKTYGIGADISWYDWNQYLIQLINLGYCEIAFHQHNKI
LLTPFAKKVLFEGEKVKLNTVVKKVIDKNEIKETKPKAAKSSLFEILRKLRYEIAKDEEV
PAYVIFSDAALRYMETFRPMSDEEFLAIDGVGKVKLEKYGREFIDAIVYYENAKKTKAKA
KKEGNTYKTTLEMFESGDTVEEIAEKRNLGQTTIVSHLAKLYVDGHDLNLTQFVSDHEVK
LLHKAQVELEYPTALRSYFDYFEEKMSYDKIRFGLAIVERNK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagaaattttacacgccaaactaaaagaaaatttcggtttcgaaaaattcaga
cccaatcaggaaactatcattaataccatactttctggtcaggataccttagcaataatg
ccaactggtggcggaaaatcaatttgttttcagttaccggctttggttttacccggaatt
accattgttatttctcctcttattgccctgatgaaagatcaggtcgatagcttgaaaacc
aacggaataaatgcctgttatatcaatagcagtcaatctagcgaagaacagcaattttat
attgataatctaaaatcaaataaattcaaactcgtttacattgcgcctgaaagtctttcg
tatcttgatgttgtttttaatgaactgacaatcagtttaattgcaattgatgaagcgcat
tgtatttcatcctggggacatgattttcgtccggcgtataccaatttgggttatttaaaa
agccgcttcccttctactcctgttctggctttgactgcgacagcagataaagcaacgcga
acagatataacaaaacaattaaatttaagaaacccaaaaacttttgtcgcttcgtttgat
cgaaaaaacttaagtctcgaagttcgtcccgcattagatcgtgtaaaacaaattattgat
tttgttgaaaataaacccaatgaatccggaattgtttattgcttgagcagaaaaacgacc
gaagaactggcgctgaaactccaaaaaaatggagtaaaagcaaaagcatatcatgccggt
ttagaaaataaacttcgtgcaaaaacacaggacgagtttattaatgatgactgtcaggta
gtttgtgcgaccattgctttcgggatggggatcgacaagtcaaacgtacgttgggtgatt
cattacaacttaccaaaaaatatagaaggatattatcaggaaattggtcgtgccggtcgt
gacggattgtcggctgaaactattttgtttgaaagttatgctgatgtaattcagcttcag
aaatttgcctcagaaggattgaattcagatgttcagttggcaaaactggaaagaatgaaa
caatatgcggatgctttgagttgcagaagaaaaattctgctttcgtactttggtgagctc
gtaaaagagaattgcggaaactgcgatatttgcaaaaatcctccaacttttttcgatggt
acgattctcgcgcaaaaagcactgtcggcaattagccgattacaggaatctgagcctttg
gctgtaattgtagattttttgcgtggctcgagaaacgcgtatatctacgaaaaaaattat
caagagctaaaaacgtacggaattggcgccgacatttcctggtacgattggaatcaatat
ttaattcagcttataaatttagggtattgcgaaattgcctttcatcaacacaataaaatt
ttgcttactccttttgcaaagaaagttttgttcgaaggcgaaaaagtaaaactaaatact
gttgttaaaaaagtaattgacaaaaacgaaattaaggaaactaaacctaaagcagcaaaa
agttctctttttgaaattcttcgaaaattacgttatgaaattgccaaagacgaagaagtt
cctgcttatgtcatttttagtgatgccgcgttaaggtatatggaaacttttcgtcctatg
agtgacgaagaatttctggcaattgatggtgttggtaaagtaaaactggaaaaatacggt
cgggaatttatagatgcgattgtgtattatgaaaatgcaaaaaaaacaaaagccaaagca
aaaaaagaaggtaacacctataagacaactttagaaatgtttgaaagtggcgatacggtt
gaagaaattgcagaaaaaagaaatctcggacaaaccacgattgtttctcatttagcaaaa
ttatatgttgatggtcatgatttaaatctaactcaatttgtttctgatcacgaggtaaaa
ctacttcataaagcacaagtagaattagaatacccaacagcgctgagatcttattttgat
tattttgaagaaaaaatgtcttacgataaaattagatttggacttgctattgtcgaaagg
aataagtaa
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