Flavobacterium bizetiae: L0669_18925
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Entry
L0669_18925 CDS
T08699
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fbi
Flavobacterium bizetiae
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
L0669_18925
Enzymes [BR:
fbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
L0669_18925
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
UTN03396
LinkDB
All DBs
Position
complement(4527484..4529337)
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AA seq
617 aa
AA seq
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MKNKIVILFLLSSLFSFAQRQMENLDRGVIAIKDKGQFFIGWRVLGTDADDLAFNLYRKS
GTKKAIKLNEKPILGATNFVDTKANSQEENTWFIKTVFKGKESDAKGSFTIPAQSPDKDY
LSIKLKPVEGYIPNDLSVGDLDGDGRYDLIVHMTGKAHDNSHTGITDPPIFQAYTLDGKF
LWQINLGKNIREGAHYTQFMVYDLDGDGISEFVCKTADGTTDSENNVVGDPSKDWVERDP
NSPILGKILKGPEYLSVFDGRTGKLITTVDYIPERGDLAGWGGHGGSGGNDTKGNRIDRF
TACIAYLDGIHPSVVMCRGYYGRTVLAAWDFKDKKLTSRWVFDSKDADNPYSGMGNHGLS
VADVDNDGKDEIIYGSMCVDDNGKGLYTTGFRHGDALHVSDLDLDVPGLEVFGIHEIENG
TTGPGVTLFSAADGKVLFTGSINEDVGRGVADNIDPTRKGAQCWWSGSPFLHDMKGNEIG
KAPSSINFLIYWDGDTSRELLNSNYIDKYNAGRLFTATGAASNNGTKSTPALSADILGDW
REELILRSEDNTELRIYSTTIPTEIRQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGVG
MKPAPKPNIVLVKFKEN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaattgtaatattatttcttttatcaagcttattttcattcgcgcaaagg
caaatggaaaatctagatcgtggtgtaatcgctataaaagacaaaggtcagttttttatt
ggctggagagttttaggaacagatgctgatgatctggcgtttaatttataccgaaaatct
ggtactaaaaaagccatcaaattaaacgaaaaacccattttgggtgcaactaattttgta
gataccaaagccaatagtcaggaagaaaatacgtggtttataaaaacagtttttaaagga
aaagaaagcgacgcaaaaggcagttttaccattcctgcccaaagtccggacaaagactat
ttatcaataaaattaaaaccggttgaaggatatatccccaatgatctttcggttggtgat
ttagacggagacggaagatacgatctcattgtacacatgaccggaaaggcgcatgataat
tcccataccggaatcacagatccgcccatatttcaggcgtataccttagatggaaaattt
ctatggcaaataaacctggggaaaaacattcgtgaaggcgcacattatacacaatttatg
gtgtacgatttagacggcgacggcatctccgagtttgtatgtaaaactgccgatggtacg
accgacagcgaaaataatgtagtaggcgatccctcaaaagactgggtagaacgcgacccc
aattctcccattttaggaaaaattctaaaaggccctgaatacctctctgtttttgacgga
agaaccggaaaactaattaccaccgtagattatattccggaacgtggtgatcttgccggt
tggggcggacatggcggcagcggaggaaatgacaccaaaggcaacagaattgatcgtttt
acggcttgtattgcttatctcgatggcattcatccaagtgtagtaatgtgccgtggatat
tacggaagaaccgttttggcagcctgggattttaaagacaaaaaactaacctcgagatgg
gtttttgatagcaaagatgccgacaatccatattccggaatgggaaatcacggactatct
gtggcagatgtcgataacgacggaaaagacgaaatcatctacggatcgatgtgtgtcgat
gataacggaaaaggattgtacacaacgggttttagacacggagatgctttgcatgtttca
gatcttgatcttgatgttcctggcttagaagtttttggaattcatgaaatcgaaaacgga
accacaggcccgggcgttaccttgttttctgccgctgacggaaaagttttatttaccggt
tctatcaacgaagatgtaggtcgcggggttgctgacaatatcgatccaacccgaaaaggt
gcacaatgctggtggtcaggatctccgtttttgcacgatatgaaaggaaatgaaatagga
aaagcaccaagttcgatcaattttttaatttattgggatggagatacttccagagagctt
ttaaactctaattatatcgataaatacaacgcaggccgcttatttactgcaacaggagcg
gcatctaataatggtacaaaatccacacccgcactttctgcagatattttaggagactgg
cgcgaagaactaatcctgagatctgaagataataccgaattaagaatttattcgaccaca
attccaacagaaataaggcaatatactttgatgcacgatccacaatacaggctgagcgta
gcatggcaaaatgtgggatacaatcagccgccacataccagtttttatatgggagtgggt
atgaaacctgcaccaaaaccaaatattgtactcgttaaatttaaggagaattaa
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