KEGG   Flavobacterium bizetiae: L0669_20150
Entry
L0669_20150       CDS       T08699                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fbi  Flavobacterium bizetiae
Pathway
fbi03030  DNA replication
fbi03430  Mismatch repair
fbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L0669_20150 (dnaX)
   03430 Mismatch repair
    L0669_20150 (dnaX)
   03440 Homologous recombination
    L0669_20150 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fbi03032]
    L0669_20150 (dnaX)
   03400 DNA repair and recombination proteins [BR:fbi03400]
    L0669_20150 (dnaX)
Enzymes [BR:fbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L0669_20150 (dnaX)
DNA replication proteins [BR:fbi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L0669_20150 (dnaX)
DNA repair and recombination proteins [BR:fbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L0669_20150 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N AAA_5 Rad17 AAA_30 DNA_pol3_gamma3 RCF1-5-like_lid AAA_16 DNA_pol3_delta_C nSTAND3 NTPase_1 AAA_24 AAA_19 AAA_18 RNA_helicase AAA_7 AAA_assoc_2 NACHT AAA_28 DUF815 Sigma54_activ_2 Mg_chelatase GNAT_acetyltr_2 NPHP3_N AAA_2 dNK TsaE
Other DBs
NCBI-ProteinID: UTN03627
LinkDB
Position
4885586..4886671
AA seq 361 aa
MEQFVVSARKYRPQTFKDVVGQKAITNTLLNAIDSNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRNLIDQVRIPPQTGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
KSQGIDFEDDALHIIAQKADGAMRDALSIFDRVVSYCGTNLTRQAVTENLNVLDYETYIS
ITDLLLENKIPDLLLAYNDILAKGFDGHHFIAGLASHFRDLLVSKTPATIALLEVGEQAQ
QMYGVQAQKCSQEFLLKGIDLANDCDLKYKLSQNQRLLVELCLMQLASISFDGEKKKLSN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggctcgtaagtatcgcccacagacgtttaaggatgttgta
ggacaaaaagctattaccaacactttgttgaatgctattgatagcaatcaccttgcttct
gcccttttatttacaggaccacgtggagttggtaaaacaacttgtgcacgtattttggct
cgaaaaataaatcagcctggatatgatgatcctaatgaagatttcgcttttaacgttttt
gagttagatgcggcttcaaacaactcggttgatgatattcgtaatcttattgatcaggtt
cgaatcccgccacaaaccgggcaatacaaagtctatattattgacgaggttcatatgttg
tcttcggcagcttttaatgcttttttgaaaacattggaagagccgccaaaacatgctatt
tttattttagcaacaacagagaaacacaagattattccaacgattttatctcgttgtcag
atttttgatttcaaaagaattaccgtaaaagatgctaaagaacatttggcagaagttgcg
aaaagtcagggaatcgattttgaagacgatgctttgcacattatcgctcaaaaagctgat
ggtgccatgcgtgacgctttatctatttttgaccgtgtggtttcgtactgcggcactaac
ttaacacgtcaggctgtaaccgaaaatctaaacgttttagattacgaaacttacattagt
attaccgatttacttttagaaaataagattccggatcttttattagcttacaatgatatt
ctggccaaaggttttgacggacatcattttattgctggtctggcttcgcatttcagagat
ttattggtaagcaaaactcctgctacaatcgctttgcttgaggtaggtgaacaagcgcaa
caaatgtatggcgtacaagcccaaaaatgttcgcaggaatttttacttaaaggaattgat
cttgcaaatgattgcgatttaaagtataaattgagtcagaaccaacgccttttggttgaa
ttatgtttaatgcaattggcctctatcagctttgatggagaaaaaaaaaagttgagcaat
tcataa

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