Flavobacterium bizetiae: L0669_21095
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Entry
L0669_21095 CDS
T08699
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0669_21095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbi03021
]
L0669_21095 (rho)
03019 Messenger RNA biogenesis [BR:
fbi03019
]
L0669_21095 (rho)
Transcription machinery [BR:
fbi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L0669_21095 (rho)
Messenger RNA biogenesis [BR:
fbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L0669_21095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
AAA_22
Rho_N
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
UTN03811
LinkDB
All DBs
Position
complement(5137971..5139881)
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AA seq
636 aa
AA seq
DB search
MFDISALKEMKLSELQEIAKLAKTIKFTGVKKETLISQILAHQETTVAPSASAVTEKENV
DDKPKRARIVPVKKAAISKNAPVLEFDTIQETPEKTEAPVAVKQTPAAKITPAAKIAPKA
KQAPVAKAAAEVKEVSEVTETPENSEVQETPAVEKKGPKIVKFNKSAYEKKVALQKEKEA
TKEAIPEGEAVAETSTAEKTEAPAIVKKVNPNQNKNPNQNPNQNPNQNQNPNANPNANGN
GNGNNGNQNPNHKNKKNNFRDSDFEFDGIIESEGVLEMMPDGYGFLRSSDYNYLASPDDI
YLSTSQIRLFGLKTGDTVKGVVRPPKEGEKFFPLVRVLKINGHDPQVVRDRVSFEHLTPV
FPSEKFKLAEKGSSVSTRIIDLFSPIGKGQRGMIVAQPKTGKTMLLKDIANAIAANHPEV
YLIVLLIDERPEEVTDMQRSVRGEVIASTFDREPQEHVKIANIVLEKAKRLVECGHDVVI
LLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNVENGGSLSIIATALTE
TGSKMDEVIFEEFKGTGNMELQLDRKIANKRIFPAIDLTSSSTRRDDLLLDEKTLQRMWI
MRKYLSDMNPVESMDFVNDRFKKTRNNEEFLISMND
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatttctgcattaaaagaaatgaagctttctgagcttcaagaaatagctaag
ttagctaaaactataaagtttactggtgtcaaaaaagagaccttaattagtcagatttta
gcacatcaggaaaccactgtagcaccgtctgctagtgctgtaactgaaaaggaaaatgtt
gatgataagcctaaaagagcaagaattgttcctgtgaaaaaagcggctattagtaaaaat
gctccagttttagaatttgatacaatacaagaaactccggaaaaaacagaagctccggta
gctgtaaaacaaactccggcagcaaaaataactccggcagccaaaattgctccaaaagcc
aaacaggcacctgtcgctaaagcagctgcagaagtaaaggaagttagcgaagtaacagaa
actcctgaaaattcagaagttcaggaaactccggcagtagagaaaaaaggaccaaaaatc
gtaaaattcaacaaatcagcttacgagaaaaaagtcgctttgcaaaaagaaaaagaagcc
acaaaagaagcaattccggaaggcgaagctgtagcagaaacttcaactgctgaaaaaaca
gaagcaccagctattgtaaaaaaggtcaatccgaaccaaaataaaaatccaaaccagaat
cccaaccaaaacccaaatcagaatcaaaatccaaacgctaacccaaatgcaaatggtaac
ggaaatgggaataacgggaatcaaaatccaaatcataaaaataaaaagaataatttcaga
gattcagactttgagtttgacggaattatcgaaagtgaaggtgttcttgaaatgatgccg
gatggttacggttttttacgttcatcagattataattatttagcctctcctgatgatatt
tatttatcaacttcacaaattagattatttggtcttaaaaccggagatactgtaaaagga
gtggttcgtcctccaaaagaaggcgagaagtttttcccattagttcgtgtacttaaaatc
aacggtcacgatccgcaagtagttcgcgatagagtttcttttgagcacttgacaccagtt
tttccttcagaaaaatttaaattagccgaaaaaggcagttcagtttcaacccgtattatc
gatttattttctccaataggaaaaggacaacgtggtatgattgtcgctcagcctaaaacg
ggtaaaacaatgttgttaaaagacattgcaaatgcaattgcagccaatcaccctgaagtt
taccttattgttcttttgattgatgagcgtcctgaagaggtgactgatatgcaacgtagt
gtgcgtggagaagttattgcttctacttttgacagagaaccacaagaacacgtgaaaatt
gctaatatcgttcttgaaaaagcaaaacgtttggtagaatgtggtcacgatgttgtgatt
cttttagattcgattacacgtttagcaagagcttataatactgttcagcctgcatcagga
aaagttttaagtggaggtgttgatgctaatgcattacaaaaaccaaaacgtttctttgga
gctgccagaaatgtagaaaatggtggttcgttaagtatcatcgcaactgcattgactgaa
acaggttctaaaatggatgaggtaatcttcgaagaatttaaaggaaccggtaacatggag
cttcaattagatcgtaagatagccaataaacgtattttccctgctattgatcttacttcg
tcaagtacacgtcgtgatgatttattattagacgagaaaacattacaaagaatgtggatc
atgcgtaaatatctatcagatatgaacccggtagaatctatggattttgtaaatgatcgt
ttcaagaaaacaagaaacaacgaagagtttttgatttctatgaatgactaa
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