Flavobacterium bizetiae: L0669_22990
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Entry
L0669_22990 CDS
T08699
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fbi
Flavobacterium bizetiae
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fbi03009
]
L0669_22990 (rimO)
Enzymes [BR:
fbi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L0669_22990 (rimO)
Ribosome biogenesis [BR:
fbi03009
]
Prokaryotic type
ribosomal protein modification factors
L0669_22990 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UTN04176
LinkDB
All DBs
Position
5596569..5597882
Genome browser
AA seq
437 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVEHEAPAEREGNIIVINTCGFI
DNAKAESVNMILEYADKKDRGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHVSQPIEKLVKEA
QGLAKNGVKELILIAQDLTYYGLDIYKKRNLAELLEELAKVEGIEWIRLHYAYPTGFPMD
VLELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDDVKQARANEIME
LQSQISWDLNQEKIGQVYKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFV
NIKIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcgaaa
aatgtatatgacagtgaagtgctaatgggacaacttcgtgcaaacggaaaagaagttgaa
catgaagcgccagcagaaagagaaggaaacattatcgtaattaacacttgtggctttatt
gataacgctaaagcggaatcagtaaacatgattttggaatatgcagacaaaaaagacaga
ggattagttgacaaagtttttgtgactggatgcttatctgaacgttacagaccagattta
gaaaaagagattcctaatgtagatcaatattttggtacaacagaattacctcaattattg
aaagctttaggagccgactataaacatgaattattaggagagcgtttgactactactcct
aaaaattatgcttacctgaaaattgctgaaggttgcgacagaccttgtagtttttgcgct
attccgttaatgagaggatcgcatgtttcgcagccaattgaaaaattagttaaggaagca
caaggtttagctaaaaatggcgttaaagaattaatcttaattgctcaggatttaacgtat
tatggtcttgatatctataaaaagagaaatcttgctgaacttctagaagaattagcaaaa
gtagaaggtattgaatggattcgtttgcattatgcttatcctaccggtttcccgatggat
gttttggaattaatgaaacgcgaacctaagatttgtaattatattgatattccgttacaa
cacatttctgattctattttgaaatcaatgcgtcgtggtactactcaggctaaaacaact
cagttattgaaagattttagagctgcagttccgggaatggctatcagaacaactttaatc
gttggatatcctggagaaactcaggaagattttgaaattttgaaagattttgttcaggaa
atgaaatttgacagaatgggatgttttgcttattctcacgaagaaaatacacatgcttac
ctattagaagatgatgttccggatgatgtaaaacaagccagagcaaatgaaataatggaa
ttgcaatcgcaaatttcatgggacctgaatcaggaaaaaattggtcaggtttacaaatgt
attattgacagaaaagaaggtgctcattttgttggaagaacagagtttgatagtccggat
gttgataatgaagttttgatcgatgcctctaaacattacgtaaaaacaggtgaatttgtt
aatataaaaataatagaagcaacagaatttgatttatacggagaacctgcttaa
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