Flavobacterium bizetiae: L0669_23245
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Entry
L0669_23245 CDS
T08699
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03030
DNA replication
fbi03430
Mismatch repair
fbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0669_23245
03430 Mismatch repair
L0669_23245
03440 Homologous recombination
L0669_23245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbi03032
]
L0669_23245
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_23245
Enzymes [BR:
fbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0669_23245
DNA replication proteins [BR:
fbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0669_23245
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0669_23245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UTN04227
LinkDB
All DBs
Position
complement(5658735..5659505)
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AA seq
256 aa
AA seq
DB search
MELKLNKPICFFDLETTGIDIGKDRIVEISIFKVFPNGNKESKTWLVNPTIPIPPQTTAV
HGITDEKVANEPTFNELAPQIHNMIKDSDLGGFNSDRFDIPLLAEELLRAGVDFDMKNKV
SVDVQTIFHKMEERTLSAALKFYCGKSLENAHSAEADTMATYEILKAQLDRYPDLENDMK
SLSEFTTRKKIADFAGMIAFDKDNEEIFTFGKHKGAKVDKILETEPGYFSWIQNADFPLY
TKKVLTAIKLRKLNTK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaactcaacaaaccaatttgcttttttgatcttgaaacaaccggaattgat
atcggtaaagatcgaattgtagaaatttcgatattcaaagtttttccaaacggaaataaa
gaaagtaaaacctggttggtgaatcctaccattccaattccgccgcaaaccaccgccgtt
catggtattacagatgaaaaagtagccaacgagccaacgtttaatgaattggcgccgcaa
attcataatatgattaaggatagtgatttgggtggttttaactcagatcgtttcgatatc
ccgcttttggcagaagaattacttcgcgccggagtagattttgatatgaaaaataaagtg
tcagtagatgtgcagactatctttcataaaatggaagagcgtacgctaagcgctgcattg
aaattctattgcggaaaaagtttagaaaatgcccattctgcagaagcagatactatggca
acgtacgaaatcttaaaagcgcaattagatcgttatccggatcttgaaaacgacatgaaa
tcattgtctgaatttacaacccgtaaaaagattgctgattttgccggaatgattgctttt
gataaagataacgaagagatttttaccttcggaaaacacaaaggtgccaaagtcgataaa
atccttgaaaccgaacctggatatttcagctggattcaaaacgctgattttcctttgtat
actaaaaaggttttgacagcaataaaattaagaaagttaaatacgaaataa
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