Ferrimonas balearica: Fbal_0252
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Entry
Fbal_0252 CDS
T01318
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fbl
Ferrimonas balearica
Pathway
fbl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fbal_0252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbl03021
]
Fbal_0252
03400 DNA repair and recombination proteins [BR:
fbl03400
]
Fbal_0252
Enzymes [BR:
fbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fbal_0252
Transcription machinery [BR:
fbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fbal_0252
DNA repair and recombination proteins [BR:
fbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fbal_0252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ADN74466
UniProt:
E1SLR7
LinkDB
All DBs
Position
282908..287116
Genome browser
AA seq
1402 aa
AA seq
DB search
MKDLLQFLKKQNASEEFNGIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIEPGMTALERGQMLTEEEYLDALEEHGDEFDARM
GAEAVQQLLKDIDLESEIAVMREELPQTNSETKRKKLTKRLKLMEAFYNSGNKPEWMIMG
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYGKLEARGLATTIKAAKKMVEREVAEVWDVLDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGDPIIVPSQDVVLGLYYMTREKVNGKGEGMVLSSVEEAEKVYRAG
LVDLHARVKVRITDSYKTEEGEIVEERKIIDTTIGRAILSMILPKGLPFALINQDMGKKP
ISAVLNSCYRILGLKSTVIFADQLMYTGFHFATVSGTSVGINDMVIPDAKKEIVASAEEE
VAEISEQFQAGLVTAGERYNKVIDIWASANEKVSKAMMENLKTDTVINRDGAEEEQKSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIVANFREGLNVQQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVSQDLVIVEQDCGSVEGISVKPLIEGGDVVEPLRERVL
GRVVAQDVIKPGTEDEVLIPRNTLLDEKWCDLIEAHSVDEILVRSVITCQTDFGVCAHCY
GRDLARGHLVAEGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRASAESNVQVKNSGILK
LQNAKYVTNADGKIVVTSRSTELAVIDDLGREKERYKLPYGAVLDKSEGAAVAAGDIVAN
WDPHTHPIITEVEGRIQFVDMVEGVTMTKQTDELTGLSSIVILDVAQRTSAGKEMRPMVK
LIDESGNDILIPGTEVPAQYFLGGHAIVSIDDGTMVRVGDALARIPQESGGTKDITGGLP
RVADLFEARKPKEPAILAEITGTISFGKETKGKRRLVITPHDGGQPYEEMIPKWRNLNVF
EGEKVERGEVIADGPEAPHDILRLRGIHAVANYIVNEVQDVYRLQGVKINDKHIEVVIRQ
MLRKCIILNGGDSEFLAGEQVEVARVHQANRLLEEQGKQPATYERELLGITKASLATESF
ISAASFQETTRVLTDAATYGKRDDLRGLKENVTVGRLIPAGTGYAYHRSRQQQAQEAAPA
VTASEAEQNLADLLNAAGPNDQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttacttcagtttcttaagaaacagaatgcgtccgaagaatttaacggcatc
aagatcggcctcgcgtcgccggacatgatccgtagctggtctttcggtgaagtaaagaag
ccggaaaccatcaactaccgtaccttcaagccggagcgtgacggtctgttctgtgcccgt
atctttggtccggtaaaggactatgagtgtctgtgtggcaagtacaagcgtctgaagcac
cgcggtgtgatttgtgagaagtgtggcgttgaagtgacccaaaccaaagtgcgtcgtgag
cgcatgggtcacatcgagctggcttctccggtggcgcacatctggttcctgaagtccctg
ccgtcccgtattggtctgttgctggacatgaccctgcgtgacatcgagcgggtgctgtac
ttcgaaagctacgtggttatcgagccgggcatgaccgccctggagcgtggccagatgctg
accgaagaggagtatctggatgccctggaagagcatggtgacgagttcgacgcccgtatg
ggtgccgaggccgttcagcagctgctcaaggacatcgatctggaaagcgaaatcgccgtt
atgcgcgaagagctgccccagaccaactccgaaaccaagcgtaagaagctgaccaagcgt
ctgaagctgatggaagccttctacaactctggcaacaagccggagtggatgatcatgggc
gttctgccggttctgccgccggatctgcgtccgctggtaccgctcgacggtggccgcttc
gcgacctccgatctgaacgatctgtaccgccgcgtgatcaaccgtaacaaccgtctgaag
cgtctgctggacctggctgccccggacatcatcgtgcgcaatgaaaagcgcatgctgcaa
gagtccgtggacgccctgctggacaacggccgtcgtggtcgtgccatcaccggttccaac
cgccgtccgctgaagtctctggctgacatgatcaagggtaagcaaggtcgcttccgtcag
aacctgctgggtaagcgcgtggactactccggtcgttccgtaattaccgtgggtccgacc
ctgcgcctgcaccagtgtggtctgccgaagaagatggctctggagctgttcaagcccttc
atctacggcaagctggaagcccgtggcctggccaccaccatcaaagccgccaagaaaatg
gtggagcgtgaagtggctgaggtatgggacgttctggatgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccgacccttcaccgtctgggtatccaggcgttcgaaccggtg
ctgatcgaaggtaaagcgattcagctgcacccgctggtgtgtgcggcctacaacgctgac
ttcgatggtgaccagatggcggtacacgtaccgctgaccctggaagcccagctggaagcc
cgcgccctgatgatgtccaccaacaacatcctgtcgcccgcttctggtgatccgatcatc
gtaccgtctcaggacgtggtactgggtctgtactacatgacccgtgaaaaggtgaacggc
aaaggcgaaggcatggtgctctcctccgtagaagaagcggagaaggtataccgcgccggt
ctggtggacctgcacgctcgcgttaaggttcgcatcaccgacagctacaagaccgaagag
ggtgagatcgtcgaagagcgtaagatcatcgacaccaccatcggtcgtgccatcctgtcc
atgatcctgccgaagggcctgcctttcgcgctgatcaaccaggacatgggcaagaagccg
atctccgccgtactgaacagctgctaccgtatcctcggtctgaaatccaccgtgattttt
gctgaccagctgatgtacaccggtttccacttcgccaccgtttccggtacctccgtaggt
atcaacgacatggtgatcccggatgccaagaaagagatcgttgcctctgccgaagaggaa
gtggctgagatctccgagcagttccaggccggtcttgtgaccgccggtgagcgctacaac
aaagtgatcgacatctgggccagcgccaacgagaaagtctccaaggcgatgatggaaaac
ctcaaaaccgacaccgtgatcaaccgtgacggcgctgaggaagagcagaagtcctttaac
agcatctttatgatggcggactccggcgctcgtggtagtgccgctcagatccgtcagctg
gctggtatgcgtggcctgatggccaagccggatggctccattatcgaaaccccgattgtg
gcgaacttccgtgaaggtctgaacgtacagcagtacttcatctccacccacggtgctcgt
aagggtctggcggataccgcactgaagaccgcgaactccggttacctgacccgtcgtctg
gtagacgtatcccaggatctggtgatcgttgagcaagactgtggttccgtggaaggcatc
tccgttaagccgctgattgaaggcggtgacgtggttgagccgctgcgcgagcgcgtactg
ggccgtgtggttgctcaggacgtcatcaagccgggtaccgaagacgaagtgctgatcccg
cgtaacaccctgctcgacgagaagtggtgtgacctgattgaagcgcactccgtggacgaa
atcctggttcgctccgtgatcacctgtcagaccgactttggtgtgtgtgctcactgttac
ggccgcgatctggcccgtggtcacctggtggccgagggtgaagcgattggtgttgttgct
gctcagtccattggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggt
gcggcatctcgtgcctctgccgagagcaacgtacaggtgaagaacagcggtatcctgaag
ctgcagaacgccaagtacgtgaccaacgccgacggcaagatcgttgtgacctcccgttct
accgaactggcggttattgacgacctgggtcgcgagaaggagcgttacaagctgccttac
ggtgctgttctggacaagagcgaaggcgctgcggttgccgctggcgacatcgttgccaac
tgggacccgcacactcacccgatcatcaccgaggtggaaggtcgcattcagttcgttgac
atggtcgaaggcgttaccatgaccaagcagactgacgaactgaccggtctgtccagcatc
gtgatcctcgacgttgcccagcgtaccagcgcgggtaaagagatgcgtccgatggtgaaa
ctgatcgacgagtccggcaacgacatcctgatcccgggcaccgaagtgccggcccagtac
ttcctgggtggtcacgccattgtgagcatcgacgacggtaccatggtacgcgtgggtgac
gctctggcccgtattccgcaggaatccggcggtaccaaggatattaccggtggtctgccg
cgcgtggccgacctgtttgaagcccgtaagccgaaagaaccggctatcctggctgaaatc
accggtaccatctccttcggtaaagagaccaaaggtaagcgtcgcctggtgatcactccg
cacgacggcggtcagccgtacgaggagatgattccgaagtggcgtaacctgaacgtgttc
gaaggtgaaaaggttgaacgtggcgaagtgatcgctgacggtccggaagctccgcacgac
attctgcgtctgcgcggcatccacgctgtagcgaactacatcgttaacgaagttcaggac
gtataccgtctgcagggtgtgaagattaacgataagcacatcgaggtggtgatccgccag
atgctgcgtaagtgcatcatcctcaacggtggtgattccgagttcctggctggcgagcag
gtggaagtggcccgtgtacatcaggccaaccgtctgctggaagagcagggcaagcagccg
gcgacttacgagcgcgaactgctgggtatcaccaaggcgtctctggcgaccgagtccttc
atctctgcggcctccttccaggagaccacccgcgtactgaccgacgctgccacctacggc
aagcgcgacgatctgcgcggtctgaaagagaacgtgaccgttggtcgcctgatcccggct
ggtaccggttacgcgtaccaccgcagccgtcagcagcaggcccaggaagccgcccccgcg
gtgaccgcttccgaagccgagcagaacctggcggacctgctgaacgccgcaggcccgaac
gaccagtaa
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integrated database retrieval system
