Ferrimonas balearica: Fbal_3044
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Entry
Fbal_3044 CDS
T01318
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fbl
Ferrimonas balearica
Pathway
fbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fbal_3044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbl03019
]
Fbal_3044
Enzymes [BR:
fbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fbal_3044
Messenger RNA biogenesis [BR:
fbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fbal_3044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
DUF5741
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADN77244
UniProt:
E1SU00
LinkDB
All DBs
Position
3425660..3426940
Genome browser
AA seq
426 aa
AA seq
DB search
MSFASQGFCPEIVQALEQCGYQKMTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPML
QSMVDKPQQRSRRHVRGLILAPTRELAQQVADNVAQYHQFLPFTSAVAYGGVKMASQARQ
LEAGVDILVATPGRLQELMEMNMVSLAQVEYLVLDEADRMLDMGFIGDIQRIRDQIKLPH
QTMLFSATYPPKMKQLAAELLKKPKMVSVGEENRTAETVAHVFYPVDEDRKIELLSELIG
RKNWQQVLVFVNYKEHADAIAEELNNDGLTTGVCHGDRSQGNRRRALKEFKEGKLRVLVA
TDVAARGLDIQGLPHVVNYDLPFLAEDYVHRIGRTGRAGLQGHAVSLVGREDELTAVQIE
RLIGQRIRRVEQPGYEARNRDALVDKFNSKAAFRDRKGRTNRASDQSGAERQLRLRQAVK
ARLKQR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgcctcacaggggttctgccccgagatcgtccaggcgctggagcagtgtggt
tatcagaagatgaccccgattcagcagaaggcgatccccctggcccgtaaaggccacgac
atcctggccaacgcccagaccggcaccggcaagaccgccgcgttcgccctgcccatgctg
cagagcatggtggacaagccgcagcaacgcagccgccgtcacgtccgcgggctgatcctg
gcccccacccgtgaactggcgcagcaggtggcggacaacgtggcccagtaccaccagttc
ctgccgttcacctctgcggtggcatacggcggcgtgaagatggccagccaggcccgtcag
ctggaagccggcgtcgacatcctggtggccacgccgggtcgcctgcaggagttgatggag
atgaacatggtcagtctcgcccaggtggaatacctggtgctggacgaagctgaccgcatg
ctggatatgggctttatcggcgatatccagcgcatccgcgaccagatcaaactgccccac
cagaccatgctgttctcggccacctacccgccgaagatgaagcaactggcggcagagctg
ctgaaaaagcccaagatggtgtcggttggcgaagagaaccgcaccgccgaaaccgtcgcc
cacgtgttctacccggtcgatgaagaccgcaagatcgagctgctgtcggagctgattggt
cgtaaaaactggcaacaggtgctggtgtttgtgaactacaaagagcacgccgacgccatc
gccgaagagctcaacaacgacggcctgaccaccggcgtctgccacggtgatcgcagccag
ggcaaccgccgccgggcgttgaaagagtttaaagagggcaaactgcgggtactggtggcc
accgatgtggcggcccgtggcctcgatatccagggcctgccccacgtggtgaactacgac
ctgccgttcctggctgaggactacgtgcaccgcatcggccgtaccggtcgggctggcctg
cagggccatgccgtatcgctggtgggccgggaagatgagctgactgcggtgcagattgaa
cgcctgattggtcagcgcatccgccgtgtggaacagcccggctacgaagcccgcaaccgc
gacgctttggtcgacaagttcaacagcaaggccgccttccgcgaccgcaaaggccgcact
aaccgcgccagcgaccagtccggtgccgagcgccagctgcgcctgcgacaggccgttaaa
gcccgcctcaaacagcgataa
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