Ferrimonas balearica: Fbal_3063
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Entry
Fbal_3063 CDS
T01318
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fbl
Ferrimonas balearica
Pathway
fbl03410
Base excision repair
fbl03430
Mismatch repair
fbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Fbal_3063
03430 Mismatch repair
Fbal_3063
03440 Homologous recombination
Fbal_3063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbl03400
]
Fbal_3063
DNA repair and recombination proteins [BR:
fbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Fbal_3063
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Fbal_3063
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Fbal_3063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADN77263
UniProt:
E1SUF6
LinkDB
All DBs
Position
complement(3441250..3442971)
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AA seq
573 aa
AA seq
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MLRITRRPQLDDSHLPETLPPLLRQIYARRGVTGAHELVTELKGLLNPATLSGAPEGAAM
LADALAAQKRILIVGDFDADGATSSALCMLALRAFGGRHLDFLVPNRFDFGYGLSPELVE
VAAERGAEVLITVDNGISAHAGVDAAKAAGMTVIVTDHHLPGETLPDADVIINPNRDACP
FASKSMAGVGVAFYLMLALRGELRRRQWFAQQGLNEPNMAELLDVVALGTVADVVPLDPN
NRLLVHQGLQRIRAGRCRPGIRALLEVSNREPSRLVASDLGFTVGPRLNAAGRLDDMALG
IECLLTDNMMEARLIASQLDALNRERREIEQGMQEEAIRVLERLDLGKDLPWGVALYQSD
WHQGVIGILASRIKERYHRPVIAFADAGGGEVKGSARSIPGLHMRDLLERIDTQHPGLIL
KFGGHAMAAGLSLKEQDYPRFAELYDAEVRVQLDEAALTGELLSDGELTAADLCLDTARM
LREAGPWGQGFAEPMFDGRFRILDQRLVGQKHLKLALETECGGRQLDAIAFNVDLGTWPN
GAIQWVELVYKLDINHWQGRDSVQLLVEHLKPA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggatcacccgccgcccccagctggacgacagccacctgcccgagaccctgccg
ccgttgttgcgccagatctacgcccgtcgcggtgtcaccggagcccatgaactggtgacc
gaactcaagggcctgctgaaccctgccaccctcagtggtgcccccgaaggggcggccatg
ctggcggacgcgctggcggcgcagaagcggatcctgatcgtcggtgacttcgacgccgat
ggggccacctccagtgccctgtgcatgctggcgctgcgggcctttggcggccgtcatctc
gacttcctggtgcccaaccgttttgattttggttacggcctcagcccggagctggtggaa
gtggcggcggagcgcggcgctgaggtgttgatcaccgtggataacggcatctccgcccac
gccggggtggacgcggccaaggccgccggcatgacggtgatcgtgaccgaccaccacctg
cccggtgaaaccctgccggacgccgacgtcatcatcaatcccaaccgcgatgcctgcccc
tttgcctccaagtcgatggccggggtcggtgtggcgttctacctgatgctggcgctgcgg
ggcgagctacgtcgtcgccagtggtttgcccagcaggggctgaatgaacccaatatggcg
gaactgctcgacgtggtggcgttgggcaccgtggccgacgtggtgccgctggatcccaat
aaccgtctgctggtgcatcaggggttgcagcgtatccgtgccggtcgctgccgtccgggc
attcgcgccctgctggaggtctccaaccgcgagccctcccggttggtcgcatccgacctc
ggctttaccgttggcccgcgcctgaacgcggcgggacggctggacgatatggcgctgggc
atcgaatgcctgctgaccgataacatgatggaagcgcggctgatcgccagccagctggac
gccctgaaccgcgagcgtcgcgagattgaacaggggatgcaggaggaggcgatccgggtg
ttggaacggctcgatctgggcaaggatctgccctggggtgtggcgctgtaccagagcgac
tggcatcagggggtgatcggcatcctcgcgtcccgcatcaaagagcgctaccaccgtccg
gtgatcgcctttgccgatgccggtggtggcgaagtgaagggctctgcccgctccatcccc
ggactgcatatgcgtgacctgctggagcgcatcgacacccagcatcccggcctgatcctg
aagttcggtggccacgccatggcggcgggcctcagcctcaaagagcaggattacccgcgc
tttgctgaactgtacgatgccgaggtgcgggtgcagctcgacgaagcggccctcaccggc
gaactgctctccgacggtgagctgaccgcggctgacctgtgcctggacactgcccgcatg
ctgcgggaagccgggccctggggtcagggatttgccgaacctatgtttgatggtcgcttc
cgcatcctggaccagcgtctggtggggcagaagcacctgaagctggcgctggagaccgaa
tgcggtggccgtcagctggatgcgatcgcctttaatgtcgacctgggcacctggcccaac
ggcgcgattcagtgggtggagctggtgtacaagctggacatcaaccactggcaggggcgg
gacagtgtgcagctgctggtggagcacctgaaaccggcctaa
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