Ferrimonas balearica: Fbal_3350
Help
Entry
Fbal_3350 CDS
T01318
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fbl
Ferrimonas balearica
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fbl03016
]
Fbal_3350
Enzymes [BR:
fbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Fbal_3350
Transfer RNA biogenesis [BR:
fbl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Fbal_3350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
CSD
Motif
Other DBs
NCBI-ProteinID:
ADN77548
UniProt:
E1SLJ7
LinkDB
All DBs
Position
complement(3791754..3793712)
Genome browser
AA seq
652 aa
AA seq
DB search
MFQDNPLLQQLKAQIRESLPTVEGTVKGTEKGFGFIETEKGESHFVPPPYMKKVMHGDKV
TAVLRTEGEKTSAEPETLLEPFLTRFVARVKRIKGRVNVVPDHPLIKDAIRARVKKSVDE
ESLQDGDYVVAHLKRHPLRPDDNTFLAEVSELVAKTDDPHVPWWVILAKHDLAKVEPADP
AQWQLADAAERTDLTELPFVTIDAESTKDMDDALYVEAKAEGGWQLTVAIADPTAYVAMG
DEVDLEAKKRSFTQYLPGFNVPMLPRQLADELCSLVEGEDRPAVAARIQVAADGALQGEA
EFFLATIRSQGKLAYDKVSDLLEGVEGAWQPESDAIAEQVNTLHALANARTAWRHEHALV
FPDRPDYRFEVDDAGNVLAIHAEYRRTANRIVEECMILANSACGALLGAKLGKGIFNSHA
GLDPEKIPAAIELLSEHGLTHCAEKVTTLEGYCQLRRDLDAQPTGYLDARIRRMQAYAEM
AAEPKPHFGMGLTGYATWTSPIRKYGDMINHRLLKAIIGQPGALNELDDDLLAHLAEKRK
LHRMCERDVGDWLYARYLKAQEGGEREYDAEVIDINRGGVRVRLKEIGAVAFVPAPFLCE
DKKRLECSGDTGIAKFDGEPVLRVADDLTVLIAEVRVDQRNVVAKPAKRFDQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaaccccttgttgcaacagcttaaagcacagatccgggaatccctgccg
acggtggaaggcaccgtaaaagggaccgaaaagggttttggctttatcgaaaccgagaag
ggcgagagccacttcgtgccgcctccgtacatgaaaaaggtgatgcacggggataaggtc
accgccgtgttgcgtaccgaaggggagaaaaccagcgccgagccggaaaccctgctggaa
ccgttcctgacccgctttgtggcgcgggtgaaacggatcaagggccgcgtgaatgtggtg
ccggaccatccgctgatcaaagacgccatccgtgcccgcgtgaaaaagagcgtggacgaa
gagagcctgcaggacggcgattacgtggtggcacacctgaagcgtcacccgctgcgtcct
gatgacaacaccttcctggccgaagtctccgaactggtggccaagaccgatgacccgcac
gtgccgtggtgggtgatcctggccaagcacgacctggccaaggtggaaccggccgatccg
gcccagtggcagctggcggacgccgccgagcgcacagatctgaccgaactgccgttcgtc
accatcgatgcagagtccaccaaggatatggatgatgccctgtacgtggaagccaaggcc
gaaggtggctggcagctgacggtggccatcgccgacccgaccgcctatgtggcgatgggc
gatgaggtggatctggaagccaagaagcgctcctttacccagtacctgccgggctttaac
gtgccgatgctgccgcgtcagctggccgatgagctgtgctcactggttgaaggcgaagac
cgccccgccgtggcggcccgtattcaggtcgcggccgatggcgcactgcaaggggaagcc
gagttcttcctcgccaccatccgctcacagggtaagctggcctacgacaaggtgtccgat
ctgctggagggcgttgaaggcgcctggcaaccggaaagtgatgccattgcggagcaggtc
aacaccctgcacgccctggccaacgcccgcaccgcctggcgtcatgagcacgcgctggtg
ttcccggaccgcccggactaccgctttgaggtggacgatgccggtaacgttctggcgatt
cacgccgagtaccgccgcaccgctaaccgcattgtggaagagtgcatgatcctggccaac
tccgcctgtggtgccctgctgggtgccaaactgggcaaaggcatcttcaacagccacgcg
ggtctggatccggagaagatcccggcggccattgagctgctgtctgagcatggcctgacc
cactgcgctgagaaggtgaccactctggagggctattgccagctgcgtcgtgacctcgac
gctcagcccaccggctacctggatgcccgcatccgtcgcatgcaggcttacgccgagatg
gcggcggagccgaagccgcacttcggtatgggcctgaccggctacgccacctggacctca
ccaatccgtaagtacggcgacatgatcaaccaccgtctgctgaaggcgatcattggtcag
cccggcgcactgaatgagctggatgacgacctgctggcccacctggcggagaagcgtaag
ctgcaccgcatgtgtgagcgtgacgtgggtgactggctgtacgcccgctacctgaaagcg
caggaaggcggcgagcgcgagtatgacgccgaggtgatcgacattaaccgcggtggcgtt
cgtgtgcgcctgaaagagatcggtgcggtcgcctttgtgccggcaccattcctgtgcgaa
gacaagaagcgtctggagtgcagcggtgacaccggcattgccaagttcgacggtgagccg
gtgctgcgcgttgccgacgacctgacggtgttgattgctgaagtgcgcgttgaccagcgc
aacgtggtggccaaaccggccaagcgcttcgaccagtaa
DBGET
integrated database retrieval system
