Ferrimonas balearica: Fbal_3442
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Entry
Fbal_3442 CDS
T01318
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
fbl
Ferrimonas balearica
Pathway
fbl02020
Two-component system
fbl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Fbal_3442
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fbal_3442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbl03021
]
Fbal_3442
Transcription machinery [BR:
fbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fbal_3442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
ADN77640
UniProt:
E1SMD1
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All DBs
Position
3886837..3888294
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AA seq
485 aa
AA seq
DB search
MKTSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPLLESAEELDRELDGD
SNDSLDDIPAPSTNSDELETSEALNQTEMPDDLPVDSTWDDVYSAAPAASAGISRDDDNL
YQGETSDDLHSHLMWQMELTPMSDTDRAIATTIIDGVDEYGYLTVTLEEILEAQGDPELE
LDEVVAVLKRVQQFDPIGSASRDLAECLLIQLAQFTPDTPWLAEARLLLIDHMDLLANRD
FRTLIRRTKLKEDELRAAMQLIQSLNPRPGSSIISSEDQYVIPDVSVSKKQGRWVVELNP
DATPKIRINEQYAALSRGARNASDSQFVRGHLQEAKWFIKSLESRNDTLLKVANCIVQFQ
QGFLEYGDEAMKPMVLNDVAEAVDMHESTISRVTTQKFIHTPRGIFELKYFFSSHVSTDS
GGECSSTAIRALIKKLVAAENPKKPLSDSKMAQLLAEQGIQVARRTVAKYREALSIPPSN
QRKSL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttcgctccagctaaaactcggccagcagctgaccatgacgccgcagttgcag
caagccatccgcctgctgcagctttcgacgctggatcttcaacaggagatccaggaggcg
ctggaatccaatccgctgttggaatcggcggaagagctggaccgcgagctcgacggcgac
agcaatgacagcctcgacgatattcccgcccccagcaccaacagcgatgagctggaaacc
tccgaagccctcaatcaaaccgagatgcctgacgacctgccggtcgacagcacctgggac
gacgtctacagcgccgccccggccgccagtgccggcatcagccgcgacgacgacaacctg
taccagggcgaaaccagcgatgacctccacagccacctgatgtggcagatggagctcaca
ccgatgagtgacaccgaccgggccatcgccaccaccatcatcgatggggtggacgagtac
ggttacctgaccgtcactctggaggagatcctcgaagcccagggtgacccggagcttgag
ctggatgaagtggtcgcggtactcaagcgggtacagcagtttgaccccattggctccgcc
tcccgtgacctggccgaatgcctgctgatacaactggcccagttcacgccggacaccccc
tggctggctgaagcccgcctgctgttgatcgaccatatggatctgcttgccaaccgggac
tttcgcaccctgatccggcgcactaaactcaaagaagatgagttaagggcagccatgcaa
ctgatccagtcgctgaatccacgtcccggcagcagcatcatttcgtcggaagatcagtat
gtgatccccgacgtctcggtgagcaaaaagcagggccgttgggtggtcgagctcaacccc
gatgccaccccaaaaatccgcatcaacgaacagtacgcggcactctcccgtggcgcccgc
aatgccagcgacagccaatttgtgcgcggccacttgcaagaagccaagtggtttatcaag
agcctggagagccgcaacgacaccctgcttaaggtggccaactgcattgtgcagttccag
caggggttcctggagtatggcgacgaagcgatgaagccgatggtgctgaacgacgtcgcc
gaagcggtggatatgcatgaatccaccatctcccgggtcaccacccagaagttcatccat
accccgcgcggtatctttgagcttaagtatttcttctccagccacgtcagcaccgacagt
ggcggagagtgctcctccaccgcaatccgtgctttgatcaagaagctggtggcggcggag
aacccgaaaaaaccgctcagtgacagcaagatggcacagcttctcgcggagcagggaatt
caggtagcgcgccgcaccgtggccaagtaccgggaagccctctccatccccccgtcgaac
cagcgtaaaagcttgtaa
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