KEGG   Ferrimonas balearica: Fbal_3565
Entry
Fbal_3565         CDS       T01318                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
fbl  Ferrimonas balearica
Pathway
fbl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fbl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Fbal_3565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fbl03021]
    Fbal_3565
   03019 Messenger RNA biogenesis [BR:fbl03019]
    Fbal_3565
Transcription machinery [BR:fbl03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Fbal_3565
Messenger RNA biogenesis [BR:fbl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Fbal_3565
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ADN77761
UniProt: E1SNV4
LinkDB
Position
4020994..4022259
AA seq 421 aa
MNLTELKQKPVSELVALAESMGLENLARARKQDILFAILKAHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSISGKIRPPKEGERYFALLKVSEVN
FDRPESSRSKILFENLTPLHANDRLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTLLLQNIAQSIAYNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAERRVFPAIDF
NRSGTRREELLAGSEELQKMWILRKILNPMQEVEAMEFLIDKLAMTKTNDEFFDAMKRAK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaccttaccgaactgaaacagaaaccggtctccgaactggttgccctggccgagtcc
atgggcctggagaacctggctcgtgcacggaagcaagacattctgttcgccatcctgaag
gcgcacgccaaaagcggtgaagacatctacggcgacggcgtcctggagatcctgcaagac
ggctttggcttcttgcgtagtgcggactcctcctaccttgccggcccggatgacatctac
gtcagccccagccagatccgccgtttcaacctgcgaaccggtgattccatctccggtaag
atccggccgccgaaagagggtgaacgctacttcgccctgctgaaagtcagcgaagttaac
ttcgaccgccccgaaagctcccgcagcaaaatcctgtttgaaaacctcacccccctgcac
gccaacgatcgtctgcgcatggagcggggtaacggttccactgaggacatcactgcccgc
gttctggatctggccagccccatcggtaaaggtcagcgtggcctgattgtggcaccgccg
aaagccggtaaaaccctgttgctgcagaacatcgcccagtccatcgcctacaaccaccct
gagtgtgtgctgatggtgctgctgatcgacgaacgtccggaagaggtgactgagatgcag
cgcctggtgaagggcgaagtggtggcctccaccttcgacgagccggcatcccgtcacgtt
caggtggctgagatggtgatcgagaaggccaagcgcctggttgagcacaagaaagacgtg
gtcattctgctcgactccatcacccgtctggcccgcgcctacaacaccgtggtaccgagc
tccggcaaggttctgaccggtggtgtggacgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcccgtaatgttgaggagggcggcagcctgaccatcatcgccaccgcgctg
atcgacaccggctccaagatggacgaagtgatctacgaagagttcaagggcaccggtaac
atggaactgcacctgtctcgtaagatcgccgagcgccgcgtgttcccggccatcgacttc
aaccgctccggcacccgtcgtgaagaactgctggcgggcagcgaagagctgcagaagatg
tggatcctgcgtaagatcctcaacccgatgcaggaagtcgaagcaatggagttcctcatc
gacaagctggccatgaccaagaccaacgacgagttctttgacgcgatgaaacgcgccaag
tcctga

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