Abyssalbus ytuae: MQE35_00725
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Entry
MQE35_00725 CDS
T08292
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbm
Abyssalbus ytuae
Pathway
fbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MQE35_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbm03019
]
MQE35_00725
03400 DNA repair and recombination proteins [BR:
fbm03400
]
MQE35_00725
Enzymes [BR:
fbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MQE35_00725
Messenger RNA biogenesis [BR:
fbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MQE35_00725
DNA repair and recombination proteins [BR:
fbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MQE35_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
CCTL2_WNK
HTH_Crp_2
DUF2582
Motif
Other DBs
NCBI-ProteinID:
UOB17837
UniProt:
A0A9E6ZL83
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All DBs
Position
196128..198029
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AA seq
633 aa
AA seq
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MLYPHEILKKYWKFETFKSPQEEIIESVLNNIDTLALLPTGGGKSVCFQVPALAKQGICI
VISPLVALINDQVENLKKKGIKAIALTGGLKYEEVDTMLDNCIYGNYKFLYLSPERLQQE
LVLDRIKQMPVSLIAVDEAHCISEWGHDFRPAYRNCYELRKVFPHINIIALTASATPEVA
KDIIDNLQLENTKVFKKSFARPNISLRVIDEIDKLYRTELILKKTHGSSIIYVRNRKACI
DISNLLNEKGVSSTFYHGGISSDEKNKKLNQWLNNEVKTMVATNAFGMGIDKPDVRTVIH
LSLPDTLENYYQEAGRCGRDGKKAQAVILKNKDDENQVKQQFLSVLPNVEFVKLVYRKLN
NYFQVPYGEGENNRFSLHFNNFCKTYSFKPTLTYNAMKVLDKYSIISLSENFNKKTTLQF
ITSNHELFKYMDRNPGTENICQSILRTYGGIFDMETKVNTSLIAAKTSSTEEKVYRVLKQ
LENDNIIKCNIQNTDAEITFLVPREDDKTINVIAKYIKQQNILKAKKVQAVINYMNNNEV
CKSIQLLNYFGEKNTPPCGICSVCKSNNNKNSTEILNAIAGEIIRCLKKQPLSSRDLIQN
LTFNEEAVLYAIQMLLEQEKITINQINQYQIIE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcctcatgaaattttaaaaaaatactggaagtttgaaactttcaaatctcct
caggaagaaataattgaaagtgttttaaataatatagacactcttgcattgttacccacc
ggcggtggaaaatcagtttgttttcaggtgccggcgttagcaaaacaaggtatatgcatt
gtcatttcccctttggtagctcttataaatgaccaggtggaaaacctgaaaaaaaaagga
ataaaagccattgcccttaccggaggtttaaaatatgaagaggttgataccatgctggat
aattgtatttatggcaactacaaatttttatatttatcacccgaacgtttacagcaggaa
cttgtattagaccggattaaacaaatgcctgtatcactcattgcagtagatgaagcccac
tgcatatcagaatgggggcacgatttcaggcccgcatacagaaattgttatgagttaaga
aaagtttttcctcatataaatattatagcacttactgcatcagccactcctgaggttgcc
aaagacattattgataatttacaactggaaaacaccaaagtatttaaaaaatcatttgca
aggcctaacataagcctaagggtaattgatgaaattgataagttgtacagaacggaactt
attttaaaaaaaacacatggttcctccataatatatgtaagaaacagaaaagcatgtata
gatatttctaatttactgaatgaaaaaggagtttcatccactttctatcacggcggtatt
tcatccgatgaaaaaaataaaaaactcaatcaatggttaaataatgaagtaaaaaccatg
gtagctaccaatgccttcggaatgggtatagacaaaccagatgtaagaacagtaatacat
ttaagcctccctgacacccttgaaaactattatcaggaggccggaagatgtggaagggat
ggtaaaaaagcccaggcggttattttaaaaaataaagacgatgaaaaccaggtaaaacaa
caattcttatcagtattacctaatgtagaatttgttaaactagtatacagaaagcttaac
aactatttccaggttccatatggcgaaggggaaaataacagattttcattacactttaac
aacttttgcaaaacatatagctttaaacccacccttacgtataatgcaatgaaagtactg
gataaatattccattatttccttgtcggaaaatttcaacaaaaaaacaacacttcaattt
attacttccaatcatgaactatttaaatatatggatagaaatccgggtacagaaaatata
tgccagagtattttaagaacctacggaggtatatttgatatggaaacaaaagttaataca
tcattaattgctgcaaaaacatcttctaccgaagaaaaagtttatagagttcttaaacaa
ttagaaaatgacaacataataaaatgcaatatacaaaacaccgatgcagaaatcaccttt
ttggttccgagggaagatgataaaacaattaatgttattgcaaaatatattaagcagcaa
aacatacttaaagccaaaaaagttcaggctgttattaattatatgaataataatgaggtt
tgtaaaagtatacagttgcttaattattttggcgaaaaaaatactcctccctgtggaata
tgttctgtctgtaaatcaaacaataataaaaactctacggaaatactaaatgctattgcc
ggtgaaataataagatgcttaaaaaaacaacctttaagttcacgcgatttaatacaaaac
cttacctttaatgaagaggctgttttatatgctatacaaatgcttttggagcaggaaaaa
attactattaatcaaataaaccaatatcaaataatcgaatga
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