Abyssalbus ytuae: MQE35_13835
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Entry
MQE35_13835 CDS
T08292
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
fbm
Abyssalbus ytuae
Pathway
fbm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MQE35_13835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbm03021
]
MQE35_13835
Transcription machinery [BR:
fbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MQE35_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
UOB16811
UniProt:
A0A9E7CST9
LinkDB
All DBs
Position
complement(3306502..3307365)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVELITADQEVELAQRIKAGDQIALERLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTYAFLEQAHERIPSAEEIAKELDMSVNDVKESMKNSGRHV
SMDAPLVEGEDSNLYDVLRSGESPNPDRELLHESLRTEIERALETLTPREADVIRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaattactaagcaggttaccaaccgggaaactgcttcattggacaag
tacctacaagaaattggaaaagttgaattaattaccgcagaccaggaagtagaattagca
caacgtattaaggcaggagaccagatagctttagaaagattaaccaaagctaatttacgt
tttgtggtatcggtagcaaagcaataccaaaatcagggtttaacacttcccgatcttata
aatgaagggaatcttggacttataaaagcggcacagcgttttgatgaaacccgtggtttt
aaatttatttcctacgcagtttggtggattcgtcagtctattttacaggcattagccgag
caatcgcgtattgtacgtttacctctaaataaaattggttccattaacaaaataaacaaa
acctatgcttttcttgaacaggctcatgaaagaattccatcggctgaagaaatagcaaaa
gagttagatatgtcggtaaacgatgttaaagaatcaatgaaaaattcaggtcgtcatgtc
tctatggatgctcccttggtagaaggtgaggattctaacctttacgatgtacttcgtagt
ggcgaatctccaaatcccgacagagagttattacacgagtctttacgtactgaaattgag
cgtgcacttgaaactcttactccccgtgaggctgatgtaatacgcctttattttggttta
ggcgaccagcatcctatgactcttgaggaaattggtgaaacttttgaccttacacgtgaa
cgtgttcgccaaattaaagaaaaagccataagaaggcttaaacatacttccagaagtaaa
atattaaaaacatatttgggataa
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