Abyssalbus ytuae: MQE35_17380
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Entry
MQE35_17380 CDS
T08292
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
fbm
Abyssalbus ytuae
Brite
KEGG Orthology (KO) [BR:
fbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fbm03016
]
MQE35_17380
Enzymes [BR:
fbm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MQE35_17380
Transfer RNA biogenesis [BR:
fbm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MQE35_17380
Prokaryotic type
tRNA splicing ligases
MQE35_17380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOB17495
UniProt:
A0A9E6ZNA2
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All DBs
Position
4152166..4153557
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AA seq
463 aa
AA seq
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MGNKLKGKDLIKLGFPRNNSINIALGQINRYCKKEKKENILEEAKEVLLAPEKFRGNAIW
GKVAEGLVKPVEVRRHQLRNTRAPFLIYGENEIDEQAKYQLYDALKLPIAVQGALMPDAH
SGYGLPIGGVLATENAVIPYGVGVDIGCRMCLTVYPIKASYLKGKQQQLENILAEHTKFG
MKETHVIKHDHEIFERAEFQDIPLIKRLKTKAYEQLGTSGSGNHFVEFGIVNITDENNEL
QLPTGDYVGLLTHSGSRGLGANIAKHYTYLATKQCPLPKNVQHLAWLDLSTHDGQEYWLA
MNLAGDYAKACHDDIHKRIGKLLGAKAVAKIENHHNFAWKEQVNGVERIVHRKGATPANK
GELGIIPGSMTTPGYIVRGLGNAESLNSASHGAGRLHSRRKCKEKFTKSDIKHQLKLNDV
SLIGGGIDEAPMAYKDIEKVMANQQELVEVSGTFIPKIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaattaaaggggaaagatctaatcaaattaggttttcccagaaacaacagc
atcaatattgctttaggacagattaacagatactgtaaaaaagaaaagaaagaaaatata
ttggaagaagccaaagaagtgttattggctccggaaaaatttcgaggaaatgctatttgg
ggaaaggtagccgaaggattggtaaaaccggtggaagttagaaggcatcaactaagaaat
acaagagctccgtttttaatttatggagaaaatgagattgacgagcaagccaaatatcag
ttatatgatgctttaaaattacccatagcagtgcagggagctttaatgccagatgcacat
tcgggttatggtttgccaataggaggggtgcttgctaccgaaaatgcagtgattccttat
ggtgtgggtgttgatattggttgcagaatgtgtttaacagtatatccgataaaagcctct
tatttaaaagggaaacagcagcaattggaaaatatactggcagagcataccaaattcgga
atgaaggaaacgcatgttataaaacacgatcatgaaatttttgaacgtgcggagtttcaa
gacattccattgataaaaaggttgaaaaccaaggcttatgaacaattgggtacctcaggg
agtggtaatcattttgtagagttcgggattgtaaatattaccgatgaaaacaatgaatta
caattacctacaggtgattatgtagggttgttaactcatagcggaagccggggtttggga
gccaatatagcgaaacattatacttatttggcaactaagcaatgtccgttacctaaaaat
gtacagcatttggcatggttggatttaagtacccatgatgggcaagagtattggttggct
atgaatttagccggggattatgctaaagcatgtcatgatgatattcataaacgaataggg
aaattactgggagcaaaagcagtagcgaagattgagaatcatcacaactttgcctggaaa
gaacaagtaaacggggtggaaaggattgtacatagaaaaggagccacccctgccaataaa
ggtgagttaggaatcattccggggtctatgacaacaccaggatatattgttcgcggtctg
ggtaatgccgaaagcttaaattctgcttctcatggtgcggggcgtttacattcacgaaga
aaatgtaaagaaaaatttacgaaaagtgatattaaacaccaattgaaattaaatgatgta
agccttattggcggtggaatagatgaggcgcctatggcctataaagacattgaaaaagta
atggcaaatcaacaagaactggtagaggtgtcagggacatttataccaaagattgtaaga
atggataagtaa
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