Candidatus Falkowbacteria bacterium NC_groundwater_1683_Pr3_B-0.1um_40_26: HY931_03020
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Entry
HY931_03020 CDS
T10142
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fbn Candidatus Falkowbacteria bacterium NC_groundwater_1683_Pr3_B-0.1um_40_26
Pathway
fbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HY931_03020 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbn03019
]
HY931_03020 (rny)
Messenger RNA biogenesis [BR:
fbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HY931_03020 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
dUTPase
KH_2
ENCP4
Phage_Mu_Gp48
DUF5920
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
QQG52289
UniProt:
A0A7T5RXT2
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All DBs
Position
643257..644780
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AA seq
507 aa
AA seq
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MEFLNYALYLVLAVGGFFIGYIFFKKSADAKISSAGEKADKIVNEAKMKEKELLLKAQDK
ALNIIEESKQEESRRRNEINQLQKRLEQRENSFSQKLLDLQEKQQKLYDKVNEVQEIKEK
IKGIQEQQSAKLEEISGMKREEAKDILLKAEEEKCAEDLMVRVNKLEQDNQDKIDEKAKD
MLALAMQRMVSSYTVELTTTTIDLPNDEMKGRIIGREGRNIKAIESMTGVEIIVDDTPNA
ITVSGFSLIRRHIAKKTLDYLIKDGRIHPTKIEEAVENAKKDIAVDIKKAGEEAMYEVGI
TGFDPKLVSILGRLKYRTSYGQNALRHSIEVAHLAAMLAEELGADVTLAKKGGLLHDIGK
AVDHEVQGNHTEIGRDIAKKFNLPPEIIAPIETHHEDHPATLISVIVKVADAISSARPGA
RSDSFENYIQRLEELEKIAMSFEGIEKSFAIQAGREVRVFVQPEMVNDLKAHNLARDIAK
KIENELKYPGEIKVNVIREMRVTEYAR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaatttttaaactatgccctgtatctcgttttggctgtcggcggtttttttattggc
tatatcttcttcaaaaagtcggctgatgctaaaattagcagcgccggcgagaaggccgat
aaaattgtcaacgaagccaaaatgaaagaaaaagagctgctcctcaaagctcaagacaaa
gccttaaacattattgaggaatccaagcaagaagaaagccgccgacgcaatgaaatcaac
cagttgcaaaaacgtctagaacagcgggaaaactctttttcccaaaaactgcttgatttg
caagagaaacaacaaaaattatacgacaaagtaaacgaagttcaggagattaaagaaaaa
atcaaaggcatccaagagcagcaatccgctaaactagaagaaatctcgggcatgaagcgt
gaggaagccaaggatattctacttaaagccgaggaagaaaaatgcgccgaggatttaatg
gtcagagtgaacaagctggaacaagacaaccaagataaaattgatgaaaaggctaaagat
atgctggccctagccatgcagagaatggtctcttcttatactgttgaattaacaactact
accattgatttgccaaacgatgaaatgaaaggccgtattatcggtcgtgaaggccgcaac
attaaagcgattgaaagcatgaccggcgtggaaattattgttgatgatacgcctaacgca
attaccgtttccggcttctcccttatccgccgccatatcgctaaaaaaactttagactat
ttaataaaagacggccgtattcacccgactaaaattgaggaagcggttgaaaatgctaag
aaagatattgctgttgatattaaaaaagctggcgaagaagcaatgtatgaagtcggaatc
accggctttgatcctaaattagtctccattttaggccgcttaaaataccgcactagttat
ggccaaaacgctttgcgccactccattgaagtggctcacttagccgctatgctggctgaa
gaattaggtgctgatgtcactttagctaagaaggggggcttactccatgatattggtaaa
gcggttgaccacgaagttcaaggcaatcacactgaaattggccgtgatattgccaagaag
tttaacttgccgccggaaataatcgccccgattgaaactcatcacgaagaccacccagct
actcttatctctgttattgttaaagtggccgatgcgatttcttccgctcgtcctggcgcc
agaagcgacagctttgagaactacattcaacgcctagaggagctggaaaagattgccatg
agctttgaagggattgaaaaatcctttgctatccaagccggacgcgaagttagagtattt
gtccagccagaaatggtaaatgaccttaaggctcataatttagctagggatattgcaaaa
aagatagaaaatgagttaaaatacccaggggagataaaagtgaacgttattcgcgaaatg
agggtcacagaatacgctagataa
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