Candidatus Falkowbacteria bacterium NC_groundwater_1683_Pr3_B-0.1um_40_26: HY931_03320
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Entry
HY931_03320 CDS
T10142
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbn Candidatus Falkowbacteria bacterium NC_groundwater_1683_Pr3_B-0.1um_40_26
Pathway
fbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HY931_03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbn03019
]
HY931_03320
03400 DNA repair and recombination proteins [BR:
fbn03400
]
HY931_03320
Enzymes [BR:
fbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HY931_03320
Messenger RNA biogenesis [BR:
fbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HY931_03320
DNA repair and recombination proteins [BR:
fbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HY931_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
MarR_2
Fe_dep_repress
AAA_30
DUF6489
Motif
Other DBs
NCBI-ProteinID:
QQG52339
UniProt:
A0A7T5UWJ6
LinkDB
All DBs
Position
complement(692023..693795)
Genome browser
AA seq
590 aa
AA seq
DB search
MLKKKEQLLELLKIHYGYESFRPGQEQAIDNILHSRDTLVVLPTGGGKSLIFQLPALVLE
GATIVVSPLIALMKDQVDSLERVGIPATFINSSISPDEASARLEKVKAGYYKIIYIAPER
FYNQSFLEGLKGIKISLFAVDEAHCVSQWGHDFRPSYLRLKDAVRFVGRPPVVALTATAT
PEVRDDIIKQLALKDPETVISGFARPNLQLAVIPSQNGQKLEHILNFLVTNPDLGAGIIY
AGTRSKTDEIMELLMDNDIKAVAYHAGMDASSRDWVQEQFMSGAARVVVATNAFGLGINK
KDIRFVIHHDLPGTVEAYYQEAGRAGRDGIDSFCLLFYHQQDRYLREFFIKGDNPEPRLI
VEIYDFLLRRAELEIDPDASILVTYAEIGQNLSESVPEMAIGTALKILEKEGYISRPNEK
NSSSFLKAKRPLAEIGAAIGKRSKMQVEIWEKLSLKYAAELETGWDFSPEEVAVVLKVKK
DSLLRAVKKLAEKDLVEYKPPFRGTEIKILKMVEPEDLNLDFKALKEKAARAYEKLDEME
NYVYHTGCRQEYILNYFGDLSAKPCGKCDSCSRLKKHPQTSSKHEYLISE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaaaaagaacaattattggaacttttaaagattcattacggttatgagtct
tttcggcctgggcaagaacaggcaattgataatattctccatagccgggataccttagtt
gttttgccgaccggtggcggcaaatctttaatttttcagttgccggctttagtgcttgaa
ggcgccacgattgtggtttcgccgctgattgcgcttatgaaagatcaagttgattctttg
gagagggttggcattccggccactttcattaattcctcaatttcgccggatgaggcgagt
gcacgtttagaaaaagtaaaggcgggttattataaaataatttatatcgctcccgagcgt
ttttataaccaaagttttttagaagggcttaagggaattaaaatttctttgtttgcagtt
gacgaagcccattgcgtcagccaatgggggcacgattttcgtcccagctacttgcgccta
aaagatgcggttcgttttgtcggccgtccgccggtcgtggctttaaccgcgaccgctacc
ccagaagtgcgcgatgatatcattaaacaattagcgcttaaagacccggaaacagttatt
agcggttttgcgcgccctaatttacagctcgctgttattccttcacagaacggtcaaaag
ctggaacatattttaaattttttagttaccaatcctgatttaggtgctgggattatttat
gccggcacgcgctctaagaccgatgagattatggagctcttaatggataatgatattaaa
gctgttgcttatcatgccgggatggacgctagtagccgcgattgggtacaggagcaattt
atgagcggcgcggcgcgagtggtagtagcgaccaatgcttttggtttgggaattaataaa
aaagatattcgttttgttatccaccatgatttgccgggaacagttgaagcttattatcaa
gaagcgggccgggcggggcgcgatggaattgatagtttttgtttgttattttatcaccag
caggatagatatttgcgcgagttttttattaagggtgataatccggaaccgcgcttgatt
gtagagatttatgattttttgttaaggcgggcggaattagaaattgaccccgacgcttct
attttagttacctacgccgaaatcggccaaaacttatccgagagtgttccggaaatggcg
attggcaccgctttaaaaattttagaaaaagaaggctatatctcccgtcctaatgaaaaa
aattctagttcttttttgaaagccaagcgaccactggcggaaattggagcggctattggt
aagcgctcgaaaatgcaagtcgagatttgggagaaattatcgcttaaatatgcagccgaa
ctagaaactggctgggatttttcgccggaagaagtggcggtggttttaaaagttaaaaaa
gattcattattgcgcgcagttaaaaaattagccgagaaagatttggtggaatataaaccg
ccgtttaggggaacggaaattaaaattttaaaaatggtagagccggaagacttaaattta
gattttaaggctttaaaagaaaaagcggcgcgtgcttatgaaaaattggatgagatggaa
aactatgtttatcatactggctgccgtcaagaatatattttaaattattttggtgattta
agtgctaagccctgcgggaaatgcgattcttgttcgcgtctcaaaaaacatccgcaaact
agcagtaagcatgaatatttaatcagcgagtag
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