Faecalibacter bovis: J9309_00400
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Entry
J9309_00400 CDS
T07705
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fbo
Faecalibacter bovis
Pathway
fbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9309_00400 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbo03019
]
J9309_00400 (rny)
Messenger RNA biogenesis [BR:
fbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J9309_00400 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
ComC_SSD
UPF0154
DUF3149
Motif
Other DBs
NCBI-ProteinID:
QTV05848
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Position
complement(83607..85178)
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AA seq
523 aa
AA seq
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MEPSTIIIALVTLIIGAVVGYFSSKKSVDKQNQELIDEATRKAQSIINEAEKEGEATKKE
KILQAKEKFLELKSKHEEVINQRERKVSDAELKVKEREDRVKYDLSEIQKQKDNIKSEKG
NLQSRIDKLNIKQKEVDTMHKKQVEILEKISNYSAEEARAELIEVLKDEAKTKAQAHIQE
IMEDAELNAKNEARKIVVSAIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRAIE
AATGVEIIVDDTPEAIILSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTTKQIED
EIIEIGKKTILDLGIHGLHKDLVKIVGRMKYRSSYGQNLLQHSREVANLAGTLAAELGLN
PKLAKRAGLLHDIGKVPEEESELPHAILGMQWAEKYGEHPDVVNAIGAHHDEIEMTSLLS
PIIQVADAISGARPGARRQVVESYIQRLKDLETTALNFDGVEKAYAIQAGRELRVIVESD
KVDDAKAAELSFLISDKIQNEMTYPGQVRVTVIRETRAVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagtactattatcattgcacttgttacattaattattggagctgtagtaggg
tatttctcatcaaaaaaatcggtagataaacaaaaccaagaattaattgatgaagctact
cgcaaagctcaaagcataattaatgaagctgaaaaggaaggcgaagccactaaaaaagaa
aaaattcttcaagcaaaagagaaatttcttgaattaaaatcgaaacacgaagaggttatt
aaccaacgtgagcgtaaggtttctgatgctgaacttaaagtgaaagagagagaagatcgt
gtaaaatatgatctttctgaaattcaaaaacaaaaagacaatatcaagtctgaaaaaggt
aacttacagtcgcgtatcgataaactaaatatcaaacaaaaggaagttgatacgatgcac
aaaaaacaagtagagatcttggaaaaaatctcaaattattctgctgaagaagctcgtgct
gagttgattgaagttttaaaagatgaggctaaaacaaaagcacaagcacacatccaagaa
attatggaggatgcagaattaaatgctaaaaatgaagctcgtaaaattgtagtttctgca
attcaacgaatcggaacagagcaagcaattgaaaattcagtttctgtatttaatattgaa
tctgatgaaatcaaaggacgaatcatcggtcgtgaaggtcgtaatattcgtgcgatagaa
gcagcaacaggtgttgaaattattgttgatgacacgccagaagcaatcattttatcatgt
tttgatccagtaagacgtgaaattgctcgtttatcattacaccgtttagtaactgacgga
cgtatacatcctgctcgtattgaggaagtagttgcaaaaactactaaacaaatcgaagat
gagatcattgaaataggtaagaaaacaatcttagatttaggtatccacggattacacaaa
gatttagttaagattgtaggtcgtatgaagtatcgttcttcttatggtcaaaatttatta
caacactctcgtgaagttgcaaatttagccggaacattagctgctgaattaggattaaat
ccaaaattagcgaaacgtgcaggtttattacacgatataggtaaagttcctgaagaggaa
tctgagttacctcacgctattttaggtatgcaatgggctgagaaatatggtgaacatcct
gatgtagttaacgccattggagctcaccacgacgaaattgagatgacatcgttattatct
ccaattattcaagttgccgatgctatttcgggtgctcgtccaggagcaagaagacaagtt
gttgaatcttacattcaacgtttaaaagatttagaaacgactgcattaaattttgatggt
gttgaaaaagcttacgctattcaagccggaagagaattacgtgtaatcgtagaaagtgat
aaagtagatgatgcaaaagctgctgaactatcattcttaatttctgataaaattcaaaac
gaaatgacttacccaggtcaagttcgtgttacagtaatccgtgaaacacgtgctgtaaat
attgctagataa
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