Faecalibacter bovis: J9309_02465
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Entry
J9309_02465 CDS
T07705
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fbo
Faecalibacter bovis
Brite
KEGG Orthology (KO) [BR:
fbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbo03032
]
J9309_02465 (topA)
03400 DNA repair and recombination proteins [BR:
fbo03400
]
J9309_02465 (topA)
Enzymes [BR:
fbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J9309_02465 (topA)
DNA replication proteins [BR:
fbo03032
]
Prokaryotic type
DNA Topoisomerases
J9309_02465 (topA)
DNA repair and recombination proteins [BR:
fbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J9309_02465 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF7343
SPAR
Motif
Other DBs
NCBI-ProteinID:
QTV06214
LinkDB
All DBs
Position
complement(489236..491761)
Genome browser
AA seq
841 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQGFLGNDFIVESSFGHVVDLPKKGMGIEIENDYKPVYEVTPDK
QDVVNKLKKLSSKADTVWLASDEDREGEAISWHLYNVLNLEKKDTKRIVFNEITKKAIQR
AVENPRQIDVNLVDAQQARRVLDRLVGFEMSPILWKKVKPGLSAGRVQSVSVRLIVEREK
EIQNFTPKSSYRFVALFSTSEDKQLKAVLTKEFSTLTEAETFLNTCINAEFSVKDLQKKP
AKRTPSAPFTTSTLQQEASRKLGYSVSRTMRVAQQLYEQGHITYMRTDSVNLSDDALSAI
QTTIESEYGNKYVEVRKYKNKNSSAQEAHEAIRPTHFENQSINADDSMRRLYELIWKRTV
ASQMANAELERTIIDIENQNNEFIFQAKGEVIVFDGFLKVYQESHDDEDADDDKVLLPKV
NIGEILKTKSINGTERFSKAAARYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEVG
ELEGQKREYHTLQLVDNKVETAVATEIYGADRRKLMPTDIGIVVNDFLVDYFKNIMDYDF
TARVESNFDDIAEGKVEWTNMIDEFYQEFHATVEDVQENAERASGEREIGIDPASGKVMH
ARIGRYGPMIQIGSADDEDKKYASLQKHQSIHNITLEEALKLFELPKVLGEYKGFEVEVN
NGRFGPYVKFDDKFVSVPKEIDPVDLSFEKAIELIEEKLQADAPIAQYEGHDVTKGKGRF
GPFIKWNEWFINVSKKYDFDNLSQADIIELIEDKKRKESERVVREWPEQGIRLEKARWGR
YNLIKGKIKVELSKETNTEAITLEEVEKIIAEHTPVKKTAAKKATTTKKASTTTKKVTKK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaatctcgtaatagttgagtccccagccaaagcaaaaaccatccaaggtttt
ttaggcaacgatttcatcgtagagtcaagttttggtcacgttgtagatttgccgaaaaag
ggtatgggtattgagattgagaacgattacaagcctgtttatgaagtaacacctgataag
caagatgtagtaaataaattaaaaaaattatcaagtaaagcagatactgtttggttagca
tccgatgaggaccgtgaaggagaagcgatttcttggcacttgtataatgttttaaattta
gaaaagaaggatacaaaacgtatcgtatttaatgagattactaaaaaggcaattcaacgt
gcagttgaaaatcctcgtcaaattgatgttaatttagtagatgctcagcaagcgcgtcga
gttttagaccgtttagttggttttgaaatgtctccaattctttggaaaaaagttaaacca
ggtttatctgcaggacgtgtacaatcagtttctgtacgattaattgttgaacgtgaaaag
gaaattcagaattttacaccaaaatcgtcatatcgttttgttgcattattttcaacttct
gaagacaaacaattaaaagctgtattaacgaaagaattttcaactttaacagaagctgaa
acctttttaaatacatgtatcaatgctgaattttctgtaaaagatttacagaaaaaacca
gcaaaacgtacaccatctgcaccatttacaacttctacattacaacaagaagcttctcgt
aaattaggatattcagtttctcgtacgatgcgcgttgctcaacaattatacgagcaaggg
catattacgtatatgagaacagatagcgttaatttatctgatgatgcattatcagcaatc
caaacaacgattgaatctgaatacggaaacaaatacgttgaagtaagaaaatataaaaac
aaaaactcttcagctcaagaagctcacgaagcgattcgcccaacacacttcgaaaatcaa
tctataaatgcagatgattctatgcgtcgtttgtacgagttgatttggaaaagaactgtt
gcttcgcaaatggctaatgccgaattagagcgaacaattatcgatatagaaaatcaaaac
aacgaatttattttccaagctaaaggggaagttattgtgtttgatggtttcttaaaagta
tatcaagaatcgcatgatgatgaagatgctgacgatgataaagttttattacctaaagta
aatattggtgaaattttaaaaacaaaatcaatcaatggtactgagcgtttctctaaagca
gctgcacgttatacagaagcgtctttagttaagaaattagaagaacttgggattggtcgt
ccttctacatatgcgccaacaatttctactatccaaaatagaggttatgttgaggttggt
gaattagaaggtcaaaaacgagaatatcacacattacaattagtagataataaagtggaa
acggctgttgcaactgaaatttacggtgcagatcgtcgtaaattaatgccaacagatatc
ggtattgtagttaatgatttcttggttgattactttaaaaatattatggattacgatttt
actgctcgtgtagaatctaattttgatgatattgctgaaggaaaagtagagtggacaaat
atgattgatgaattttatcaagaatttcacgctactgtagaagatgttcaagaaaatgca
gaacgtgcttctggagaaagagaaattggtatagatccagcttcaggaaaagtaatgcat
gctcgtattggtcgatatggtccaatgattcagatcggtagtgctgatgatgaagataaa
aaatacgctagtttacaaaaacatcaatctatacataatattacgttagaagaagcttta
aaattatttgaattacctaaagtgttaggagaatataaaggttttgaagttgaggtgaat
aacggtcgttttggaccttatgtaaaatttgatgataaatttgtttctgttcctaaagaa
attgatcctgttgatttatctttcgaaaaagcaattgagttaatcgaagaaaaattacaa
gctgatgcacctattgcacagtacgaaggacacgatgtaacgaaaggaaaaggaagattt
ggaccgtttattaaatggaatgaatggtttattaatgtttctaaaaaatatgatttcgac
aatttatctcaagctgatattatcgaattaattgaagataaaaaacgcaaagaatctgaa
cgtgttgttcgcgaatggccagaacagggaattcgtttagaaaaagcacgttggggacgt
tataacttaattaaaggtaagattaaggttgaattgtctaaggaaacaaatactgaagcg
attactttagaagaagttgaaaaaattattgctgaacatacacctgttaaaaaaacagca
gcaaaaaaagcaacgactactaaaaaggcttcgactacgactaaaaaagtgacgaagaaa
aaataa
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