Faecalibacter bovis: J9309_10515
Help
Entry
J9309_10515 CDS
T07705
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
fbo
Faecalibacter bovis
Pathway
fbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9309_10515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbo03019
]
J9309_10515
Enzymes [BR:
fbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J9309_10515
Messenger RNA biogenesis [BR:
fbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J9309_10515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Flu_PA
MIOX
DUF1657
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QTV05206
LinkDB
All DBs
Position
2167690..2169111
Genome browser
AA seq
473 aa
AA seq
DB search
MKIQEAVTLPLFKNVCEVADQINQETYVVGGFVRDYLLGREQKKDIDFVTVGNGILLAKE
LSKSLGNTSQVSVFKRFGTAMFRYNDIELEFVGARKESYSEDSRKPHVEDGSLEDDQKRR
DFTINTLAISMNKETFGDLIDPFNGVEDLRNGIIRTPLDPNITYSDDPLRMMRAIRFAAQ
LNFVIEEKSFQAIIDNASRLEIVSFERVMDEFQKIMMTDKPSFGLSLLEKAGLLQYILPE
LTALKGIEEVEGQRHKDNFYHTLEVVDNISLYTDNIWLRWAALLHDIGKAVTKRFDKKVG
WTFHSHEFVGSKMVVKLFRRLKLPLGPQMKYVQKLVMMSSRPIAVVDEDATDSALRRLLF
DAGEDFEDLIKLCKADITTKNERKQKRFKQNFELVEEKIKDVEERDRVRNFQPPISGEQI
MEMFGLTPCKEVGIIKNAIKEAILEGEVENNYNSAYNYVVDLGKKLNLELKNS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccaagaagctgtaacattaccattatttaaaaacgtatgtgaagttgctgat
caaataaatcaggaaacatatgttgtaggtggttttgtgcgcgattacttattaggaagg
gaacaaaaaaaggatattgattttgttacggttggtaatggaatattattggccaaagaa
ttatcaaaatctttaggtaatacatcacaagtttcagtatttaaacgtttcggaacagca
atgtttcgttataatgatatagaattagaatttgttggtgcaagaaaagaaagttattca
gaagatagtagaaagcctcatgtagaagatggttcattagaagacgaccaaaaacgtcgt
gattttaccatcaatacattagctatttctatgaataaagaaacatttggagatttaatt
gatccatttaatggagtagaagatttaagaaatggaattattcgtacaccattagatcca
aatattacatattctgacgatccattacgtatgatgcgcgcaattcgatttgcggctcaa
ttaaatttcgtgatcgaagaaaaatcttttcaagcaatcattgataatgcatctcgttta
gaaattgtttcttttgaacgtgtgatggacgagtttcaaaaaataatgatgactgataaa
ccttctttcggtttaagtttattagagaaagctggtttattacaatatattttgcctgaa
ttaactgctttaaaaggaattgaagaagttgaaggtcaaagacataaagataatttttat
cataccttagaagtggtagataacatatcattatatacagataacatttggttacgttgg
gcagctttattgcatgatattggtaaagcagtaactaaaagattcgataaaaaagttgga
tggacattccattcgcacgaatttgttggttcaaaaatggtagttaaactgtttagaaga
ctaaaattaccattaggaccacaaatgaaatatgttcagaaattggtaatgatgagttca
agaccaattgcagttgtggatgaagacgctacagattctgcattaagaaggttgttgttt
gacgctggagaagattttgaagatttaatcaaactttgtaaagcagatattacaacgaaa
aacgaacgtaaacaaaaacgattcaaacaaaattttgaattagttgaagaaaagataaaa
gacgtcgaagaacgtgatcgtgttcgtaattttcaaccaccaatttcaggtgagcaaatt
atggaaatgtttggattaacgccttgtaaagaggtaggaataattaaaaacgccataaaa
gaagctatcttagaaggtgaagtagaaaataattataattctgcatataattatgttgta
gatttaggaaaaaagttaaatttggaattgaaaaatagttaa
DBGET
integrated database retrieval system
