Flavobacteriaceae bacterium AU392: D1817_00060
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Entry
D1817_00060 CDS
T09691
Name
(GenBank) type II and III secretion system protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
fbq
Flavobacteriaceae bacterium AU392
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fbq02044
]
D1817_00060
02035 Bacterial motility proteins [BR:
fbq02035
]
D1817_00060
Secretion system [BR:
fbq02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
D1817_00060
Bacterial motility proteins [BR:
fbq02035
]
Pilus system
Pilus assembly proteins
D1817_00060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AXT21188
LinkDB
All DBs
Position
complement(28980..30911)
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AA seq
643 aa
AA seq
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MIYKILIISVCFLMFNISFSQSPANIKTFTEKIDELAKTKKGLEDNVRIDLTGLTLYDFI
NALADEHQLNVSVDIKLNQLVTSNFYDVNIKDVFLFLIQKHQLEVDVVNNILVFNKKQEI
PIVKKPEPLKQIDVNYNDQNKFLSVKLKNDSLPRVAQAITDISKKNVVLSPSIKGEKISA
YILNRPFDQVMEMIAKSNNLILTKDENDNYYLDKAILEENPKPSPKPNTNRRNRTQTRNT
NNPVENAGFQIKINPQGYINVKAFEADASQMIIEAADKLNINFIMYDTPEGVSTTLNANE
ISFDELLNHLFEGENYTYKIIDNSYLIGEHTTEGLRETELVQLENRTIETVLGTLPAKLI
ENLEIKEFIELNGFVVSGSRTRIQEFKDYIYEIDIVVPVIQIEVIIVQYQKSYQIQTGIR
AGIDDQQRTTSGVLFPTSDVNLNSTSVNSLIDAFNGLGIFKIGKVTEQFYLNLQAMENNS
LIKLSSTPKLVTLNGHEATSSIGETSYYFEQNNRLINSGVNNNILQSGVWRPTEANLSLN
IKPLVSKGDNVTLTIYVERSSFLGRVAETAPPGKATQKFETVISVKNNEMILLGGLDELE
NENTGTGTPFLSRVPVLKWLFSSRSKRKEKSKLHIFIKPTVIY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatatataagattctaataatatcagtatgctttttaatgtttaatataagcttttca
caatctcctgctaatattaaaacatttacagaaaaaatagatgagcttgcaaaaactaaa
aaaggattagaagataatgttagaattgatttaacaggactaacactttatgattttatt
aatgcattagcagatgaacatcaattaaatgtgagtgtagatattaaattaaatcaacta
gttacaagtaatttttatgatgttaatattaaagatgtatttctgtttttaatccaaaaa
catcagttagaagtagatgtggtaaacaatattttagtattcaataaaaaacaagaaata
ccaattgtaaaaaaaccagaaccattaaaacaaattgatgttaactataatgatcaaaat
aaatttttatctgttaaactaaaaaatgactctttgccaagagttgcacaagctattact
gatatatctaaaaagaatgtcgtattgtccccgagtataaaaggagaaaaaatatctgca
tatatacttaataggccatttgatcaagtaatggaaatgatcgctaaatctaataattta
atattaactaaagatgagaatgataattattatttagacaaagctattcttgaggaaaac
ccaaaaccttcacctaaaccgaatactaatagaagaaatcgtactcaaactagaaataca
aataatccggtcgaaaatgctggatttcaaattaaaattaatcctcagggatacataaat
gtaaaagcttttgaagcagatgcttctcaaatgattattgaggctgcagataaattaaat
attaatttcattatgtatgacactccagaaggtgtaagtacaacattaaatgctaatgaa
ataagttttgatgagcttttaaatcatctttttgaaggagaaaattacacatataaaata
atagataactcatacttaattggagaacatactactgaagggttgagagaaacagagtta
gtacaattagaaaatagaacaatagaaacagtattgggtacactcccagccaaattaata
gaaaaccttgagattaaagaatttattgaacttaatggttttgtagtttctggttcaaga
actcgtattcaggaatttaaagattatatctatgaaattgatattgtagtaccggtaatt
caaatagaagtgattattgttcaatatcaaaaatcatatcaaattcaaacaggaatccga
gctggaatagatgatcaacaaagaacaacttctggtgttcttttccctacatcagatgta
aatctcaactctacttctgtaaatagtttaattgatgcttttaatggactggggatattt
aaaattgggaaagttacagaacagttttatttgaacttacaggcaatggaaaataattcg
ctcattaaattatcatcaacccctaagttagttacattaaatggtcatgaagctacttca
tcaataggagaaactagttattattttgaacagaataatagattaattaattctggtgta
aataataatattttacaatctggagtttggaggccaacagaagcaaacttgagtttaaat
attaaacctcttgtttctaaaggtgataatgtaacacttacaatttatgttgaaagaagt
tcatttttaggaagagtggcagaaactgcgcccccaggaaaagcaactcaaaagtttgaa
actgtcatcagtgtcaaaaacaatgaaatgattttgttgggtggtttagatgagttagaa
aatgagaatacgggaacagggaccccttttttatctagagtaccagttctcaaatggctt
tttagtagtcgctcaaaaagaaaagaaaaatcaaagcttcacatttttataaaacctaca
gtaatttattaa
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