Flavobacteriaceae bacterium AU392: D1817_00215
Help
Entry
D1817_00215 CDS
T09691
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fbq
Flavobacteriaceae bacterium AU392
Pathway
fbq03030
DNA replication
fbq03430
Mismatch repair
fbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1817_00215
03430 Mismatch repair
D1817_00215
03440 Homologous recombination
D1817_00215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbq03032
]
D1817_00215
03400 DNA repair and recombination proteins [BR:
fbq03400
]
D1817_00215
Enzymes [BR:
fbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1817_00215
DNA replication proteins [BR:
fbq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1817_00215
DNA repair and recombination proteins [BR:
fbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1817_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AXT18341
UniProt:
A0A3A9V378
LinkDB
All DBs
Position
complement(61826..66214)
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRFNAPITDTDNWPRCIQIAWQLHDEMGNCIESQDYLVQPDGFNIPY
DAEKIHGISTELAQEQGIPLVEMLEKFNEALGKAKFVVGQNVKFDLNIMGCEFFREDITN
PLQELPVLDTCTEYTAELCKIPGGRGGKFKLPTLTELHQFLFDTPFGEAHNATADVEATT
RCFFELIRLKKYTKEQLDVAPDYFERFSQANPKQIQLIGLKHINLKQASAKINERIAKEQ
AQQDKFQEDSAVDIASLNALDFVHLHNHSQFSVLQSTISIKDLVASAAKHHMPAVALTDH
ANMMGAFHFVKEVKNHNRAVKEKNAEAEAKGEAPVAKEIKPILGCEFFVCDDHTNKSQKD
YGYQIVLIAKNKNGYQNLAKMSSIAYTDGFYYVPRIDKKVIEQYKEDILVLTGNLYGEVP
SKVLNVGEKQAEEALVWWKEQFGGDLYLELMEHGQEDEKRANQVLKQLAKKHDVKVVATN
NTYYCEQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSDEMKDLFKHTP
EAIINIQEVVDKIEAFELARDVLLPKFDIPEKFKSEEDEVDGGKRGENAFLKHLTFEGAK
IRYGEITEEIKERLDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPLKYDLLFERFLNPDRISMPDIDIDFDDEGRGRVMDYVIDKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLGDADRISKLIPTMSKLGKIFGVPEKELRSKFRAEDLEK
VNELLNISEGNDLEAETVNQARILEGSVRNTGIHACGVIITPDDITNFVPVAVAKDSDLY
VTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHNILLDPDNFSLDDEETYALFQ
RGETVGIFQYESPGMQKHLKDLKPTVFDDLIAMNALYRPGPMEYIPSFINRKHGTETIEY
DLPEMEEYLKQTYGITVYQEQVMLLSQKLADFTRGEADVLRKAMGKKQKAVLDKMKPKFI
SQAAAKGMDEKKLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKSVTFFMEECKRMKLNVLGPDVNESYYKFSVNQDNAVRFGMGAIKGVGSGAVAT
IVEHRKTDAGPYKSIFDMAKRIDLRAANKKAFENLANAGAFDSFDAHRAQYFHDTGDGIT
FLEKTIRYANKYQENENSAQVSLFGEASDVQIPEPEVPPCEEWGTMEKLAREREVVGIYI
SGHPLDDFKTEMKTFCNATLAMFNNLEPYVNRELTFGGVVTDVQHRVSKQGKGWALFTVE
DYTDTFEFRIFGEEYLKYRHFLLRNSFVYVRSYVKEGWVNRETGKKSDPRIQFSNFQLLH
DVMDVYAKKLSIQLNIKDIQGERIKKLKELMNMHPGNHMLNFLIYDNEESIKLQMPSRKQ
KVKISQELLEELEAQKVYYKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatacagaaaccacagggttaccaaagcgatttaacgctccgatt
actgatacagataattggccacgttgtatacaaattgcatggcaattgcatgatgaaatg
ggaaactgtattgaaagtcaagattatttggtgcaaccagatgggtttaatattccttat
gatgcagagaaaattcacggaatttctacagaattagcccaagagcagggaattccttta
gtcgaaatgctagagaaatttaatgaagctttagggaaagcgaaatttgtagttgggcag
aatgtaaagttcgatcttaatatcatggggtgtgaattttttagagaagatatcactaat
ccattacaagaattaccagttttagatacctgtacagaatacacagcagaattatgtaag
attcctggagggcgcggcggaaaatttaaattaccaacacttacagagttacatcaattt
ttatttgatactccatttggggaagcacataatgcaactgccgatgttgaagcaacaaca
cgttgttttttcgaacttattcggttaaaaaaatacactaaagagcagttagatgtagca
ccagattattttgagaggttttctcaagcaaatccaaaacaaattcaacttattggatta
aagcatattaatcttaaacaagcttcggcaaagattaatgagcgtattgctaaagaacaa
gcacaacaagataaatttcaagaggatagcgctgtagatattgcttctctaaacgcttta
gattttgtgcatttacataaccactcacaattttcagtattacaatctactattagtatt
aaagatttagtggcttcggcagcaaaacatcatatgcctgctgtagcgttaaccgatcat
gctaatatgatgggagcttttcactttgtgaaagaagtaaaaaatcacaacagagctgta
aaagagaaaaatgcagaagctgaagcaaaaggggaagcacccgttgcaaaagagataaaa
cctattttaggatgtgagttttttgtttgtgacgatcacaccaataaatcacaaaaagat
tatggataccaaatcgtactgatcgcaaaaaataagaatggctatcagaacttagcaaaa
atgtcatctatcgcttatacagatggattttattatgtccctcgaatagataaaaaagtt
attgaacaatacaaggaagatattttagtacttacgggaaacctctatggagaagtacct
agtaaagtgcttaatgttggtgaaaaacaggctgaagaagccttggtttggtggaaagaa
cagtttggtggagacttgtatttagagttgatggagcatgggcaagaagacgaaaagcgt
gcaaaccaagtattaaaacagcttgccaaaaaacatgatgtaaaagtagtagctactaat
aacacttattactgtgagcaagaagatgctaatgcacacgatattttattatgtgtaaaa
gatggtgagaagcaggcaacccctataggtcgaggtcgaggatatcgttatgggttacca
aatcaagaatattatttcaagtcttcagacgaaatgaaagacttgtttaaacatacacct
gaagcaattataaatattcaagaagttgtagataaaattgaagcttttgaattggcgaga
gatgtcttgcttcctaagtttgatattccagagaaatttaaatctgaagaagatgaagta
gatggtgggaaacgtggtgagaatgcattcttaaaacacttaacttttgaaggtgcaaaa
ataagatatggcgaaattacagaagagataaaagaacgtcttgattttgagttaagcgta
atagagaatacaggatatccaggatactttttaattgttgaagattttattcgtgaagcg
agaaacatggatgtgtctgtaggtccaggacgtggatcggcagctggatctgtagtagca
tactgcctttggattaccaatatagatcctcttaaatacgatttgctttttgagcgtttc
ttaaatccagatcgtataagtatgccagatattgatattgattttgatgatgaaggtcgt
ggtcgcgtgatggattatgtaattgataagtatggatctaatcaggtagcacaaattatt
acttatggtacgatggcggcaaaatcatctattcgagatacggctcgagtattagattta
ccattgggagatgctgataggatttcgaaactaattccgacaatgtctaagttgggaaaa
atatttggagttcctgaaaaggaattacgaagtaagtttagagctgaagatctagaaaaa
gtaaatgagcttttaaatatttctgaaggaaatgatctggaagctgaaactgtaaatcaa
gcacgtatcttagagggttcagtgcgtaatacggggattcatgcttgtggtgtaattatc
actccagatgacattaccaatttcgtacccgtagctgttgcaaaagattccgacttatat
gttacacaatttgataactctgttgtagaggatgcaggtctattaaaaatggatttttta
ggattaaaaaccctaaccttaattaaagacacggttaaaattgtaaaagcaaagcacaat
atccttttagatcctgataatttttctttggatgatgaagaaacttatgccttattccaa
cgtggagaaactgtagggatatttcaatacgaatctccaggaatgcaaaagcatttaaaa
gatttaaagccaacagtttttgatgatttaattgcaatgaatgcactctatagaccaggg
cctatggagtatattcctagttttattaatcgtaaacacggtaccgaaacgattgagtat
gatcttccagaaatggaagaatacctaaagcaaacctatggaattacagtatatcaagag
caggtaatgttgctttcacagaaattagctgattttacaagaggtgaggcagatgtgtta
cgaaaagccatggggaaaaagcaaaaagctgttctggataaaatgaaacctaagtttatt
tctcaagcagctgccaaaggaatggatgagaaaaagcttgagaaaatatggaaagactgg
gaagcttttgcgagctatgcgtttaataaatcgcactctacatgttatgcttggattgct
taccaaaccgcatatttaaaagcacattatccagcagagtatatggcagcagtactgtct
aataatatgaatgatattaaatcggtaaccttttttatggaagagtgcaagcgtatgaaa
ctgaatgtgcttgggccagatgtaaatgaatcctattataaattctcagtaaatcaagat
aatgctgtgcgctttggaatgggcgcaataaaaggagtagggagtggtgctgtagctact
atagtagaacatcgtaaaacagatgctggaccttacaaatctatttttgatatggcaaag
cgtattgatttacgtgccgctaataaaaaagcatttgaaaatctagccaatgcaggtgca
tttgatagttttgatgcccatcgtgcacagtattttcacgatacaggtgatggaattacc
tttttagaaaaaacaattcgttatgcaaataaatatcaggagaatgagaattctgcgcaa
gtaagtttatttggtgaagctagcgatgtacaaattcccgaacctgaagtgccgccatgt
gaagaatggggaacgatggaaaaattagcacgcgagcgtgaagtagtagggatttatatt
tctggacatccgttagatgactttaaaactgaaatgaaaactttttgcaatgcaacttta
gcaatgttcaataatttagaaccttatgtaaatcgtgaacttacttttggaggcgtcgta
accgatgtacagcatcgtgtaagcaaacaaggaaaaggctgggcattatttactgtagaa
gattatacagatacatttgagttcaggatttttggtgaagagtatcttaaatacaggcat
tttttattgcgtaacagctttgtgtatgtccgttcctatgtaaaagaaggttgggtaaat
agagagacaggtaaaaagagtgatcctcgaattcagtttagtaactttcaattattacat
gatgtgatggatgtgtatgctaaaaaactatccatacaattaaatataaaagatatacaa
ggtgagcgtattaagaaattaaaagaattgatgaatatgcaccctggaaatcatatgtta
aactttttgatctacgataatgaagaaagtattaaattgcaaatgcctagcagaaaacaa
aaagtaaagatttctcaagaactgttagaagaattagaagcacagaaggtatattataag
ttgaactaa
DBGET
integrated database retrieval system
