Flavobacteriaceae bacterium AU392: D1817_00550
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Entry
D1817_00550 CDS
T09691
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fbq
Flavobacteriaceae bacterium AU392
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbq03019
]
D1817_00550
03009 Ribosome biogenesis [BR:
fbq03009
]
D1817_00550
Messenger RNA biogenesis [BR:
fbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1817_00550
Ribosome biogenesis [BR:
fbq03009
]
Prokaryotic type
rRNA processing factors
D1817_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
TRF
DUF6305
Motif
Other DBs
NCBI-ProteinID:
AXT18406
UniProt:
A0A3A9URX0
LinkDB
All DBs
Position
124878..126425
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AA seq
515 aa
AA seq
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MNKELIIRSSSNDVDFALLKDGKLIELQKEGDDNKFAVGDVFLAKIRKAVPGLNAAFVNV
GYEKDAFLHYHDLGPKLPTLLKFIKRVSTGKLKDYSLKDFPFEKDIDKNGSISDAIKSNQ
SVLVQIVKEPISTKGPRISSELSIAGRYLVLVPFSDRISISQKIESKEEKERLKRLVKSI
TPKGFGVIVRTVAEGKKVAELDRDLQNLYDRWTVMCKKLQKANHPSKVLGEMNKASSILR
DIFNDTFTSIIVDDESLYIQIKDYVQEIAPKKESIVKLYQSNVPVFEKFGIERQIKTSFG
RTVSMAKGAYLVIEHTEALHVIDVNSGNRSNKAKSQEDTALEVNMIAASEMARQLRLRDM
GGIIVVDFIDMGKAENRRTLYNHLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREENPNGANGQEVEAPIGIVSKIAHDLEQLAKKDYKKVTLNTHPFIAAFLTKGFPSIRS
KWYFEHKKWVKILPRDAYTYLEYNFVDKDGTEIKL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaattgattattcgttctagttctaatgacgttgattttgccttattaaaa
gatggaaaactaattgaattacaaaaagaaggagatgacaacaaatttgccgttggtgat
gtgtttttagccaaaatacggaaagctgtccctggtcttaatgctgcatttgttaatgta
ggttacgagaaagatgcatttttgcattatcacgatttaggaccaaaacttcctactctt
ttaaaattcattaaacgtgtaagcacaggtaaacttaaagattattctttaaaagatttc
ccatttgaaaaagacattgataagaatggaagcatctcagatgctataaaatctaatcaa
tcggtactcgtacaaattgtaaaagagccaatatctaccaaaggaccccgaataagctcg
gaattatccattgctggtcgatatttagttttagttcctttttctgatcgtatttcaatt
tctcaaaaaattgaatcaaaagaagaaaaagagcgacttaaaaggcttgttaagagtata
actccaaaaggttttggagttattgtacgtactgttgccgaaggcaaaaaagtagctgaa
ctagatagagatttacaaaatctctatgatcgttggacagtaatgtgcaaaaagctacaa
aaagcaaatcatcccagtaaagtgttaggagaaatgaataaagcctcttctattttaaga
gacatttttaatgacacatttacatctataattgtagatgatgaatcgctttacattcaa
attaaagattacgtgcaagaaattgcaccaaaaaaagaatcaatagttaaattgtatcag
tctaatgttcctgtttttgaaaaatttggaatagaacgacaaattaaaacatcctttgga
cgtactgtttctatggcaaaaggcgcttatttagtaattgaacatactgaagcccttcat
gttatagatgtaaatagtggtaatcgctcaaacaaagcaaaaagtcaagaggatacagct
ttagaagttaatatgatcgctgcttcagaaatggctcgtcaattacgtttacgtgatatg
ggtggcattattgtagtcgattttatcgatatgggaaaagctgaaaatagaagaacgctc
tacaaccatcttcgtgatgaaatgaaagatgatcgagcaaaacataaaatattaccccca
agtaaatttgggttgatacaaataactagacaacgagtgagaccagaaatgaacattaaa
accagagaggaaaatcctaatggtgcaaatggacaagaagttgaagctcctattggaatt
gtgagtaaaattgctcatgatttagaacaactagcaaaaaaagactataaaaaggtgact
ttaaacacacatccttttatagcagcttttttaactaaaggctttccatctatacgttca
aaatggtattttgaacataaaaaatgggtgaaaatattaccaagagatgcttacacatat
ctagagtacaactttgttgacaaagatggtactgaaattaaattataa
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