Flavobacteriaceae bacterium AU392: D1817_11780
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Entry
D1817_11780 CDS
T09691
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fbq
Flavobacteriaceae bacterium AU392
Pathway
fbq03030
DNA replication
fbq03430
Mismatch repair
fbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1817_11780
03430 Mismatch repair
D1817_11780
03440 Homologous recombination
D1817_11780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbq03032
]
D1817_11780
03400 DNA repair and recombination proteins [BR:
fbq03400
]
D1817_11780
Enzymes [BR:
fbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1817_11780
DNA replication proteins [BR:
fbq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1817_11780
DNA repair and recombination proteins [BR:
fbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1817_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DUF7508
DEDDh_C
DNA_pol_A_exo1
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AXT21272
LinkDB
All DBs
Position
2586962..2588338
Genome browser
AA seq
458 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKYDGHQVIDQFISLVNPEREIQPFVVNLTGINSKM
LRNAPKFYEVAKRIVEITEDCIIVAHNALFDYRILQTEFKRLGFNFTKKTLCTVELSKDL
IPDQPSYSLGKLTRVLGIPVSDRHRASGDAQATVKLFKLLLDKDLDKKIISESVKTDSRD
TIAPKLLDIIESLPSITGVYYIHNANGEIIYIGKSKNIRQRVNQHFTNDSTKSKKIQLQV
SSITYEATGSELIALLKESEEIKRNKPIFNRALKRTHFSYGLYQFTDSLGYLNLRAYTVK
SQSEIETPITTFSNLQSAKSFLNRMAIRYNLCQKLTGLQKTSSNCFNYTIKECFGACIKN
ETPDIYNKRIRNLIADYSFENKSIVIVGKGRSIDERSAILIKNGIFIGIGFFNLNYQINN
IDVLESFITPMEHNKDVQHIIQSHLRKNKKMKVITLHS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattttagacatagaaaccaccgggggcaagtataatgaagaaggaattaca
gaaattgcgatctacaaatatgatggccatcaagtaatagatcaatttataagtcttgtt
aatccagagcgagaaatccaaccttttgtcgttaaccttactggtattaatagtaagatg
cttcgtaatgcgcctaaattttatgaagtagcaaaacgtattgttgaaatcactgaagat
tgtattatagttgctcataatgcattgtttgattatcgtattctgcaaacagaatttaaa
cgtttggggtttaattttactaaaaaaacactctgtacagtagaactttctaaagactta
attcctgatcaaccttcttatagtttaggaaaacttacaagagtactaggcattcctgtt
agtgataggcatcgagcttctggagatgctcaggctacagtgaagcttttcaagttatta
ttagacaaagatttagataaaaaaataataagtgaatctgtaaaaacagattctagagat
acaatagctccgaaattattagatattatagaatctctaccaagcattactggagtgtac
tatatacataatgctaatggggaaatcatttatatcggaaaaagcaaaaatattagacaa
cgtgttaatcagcatttcactaatgatagcacaaaatctaaaaaaatacagctacaagtt
tcatctattacatatgaagctactggtagtgaacttatagctctattaaaagaaagcgaa
gaaattaaacgcaataaacctatttttaatcgtgcattaaaacgcactcatttttcgtat
ggtttatatcagtttacagatagtttaggttatttaaatttaagagcatatacagttaaa
agtcaaagcgaaatcgaaactccaattactacattttctaatttacaaagtgctaagagc
tttttaaatcgtatggctattagatacaatttatgtcagaagttaacagggcttcaaaaa
acaagtagcaattgttttaattatactataaaagagtgttttggagcttgcattaaaaac
gagactcccgatatatataataaaagaataagaaaccttattgctgattatagttttgaa
aacaaaagtatagttattgtaggtaaaggtcgttcaatagatgaacgtagtgctattctt
ataaaaaatggtatatttataggcatagggttctttaatctcaattatcaaataaacaat
atcgatgttttagaatcctttataacacctatggaacataataaagatgtacaacatatt
attcagagtcatcttaggaaaaataaaaaaatgaaggttattactctacattcataa
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