Flavobacteriaceae bacterium AU392: D1817_13680
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Entry
D1817_13680 CDS
T09691
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
fbq
Flavobacteriaceae bacterium AU392
Pathway
fbq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D1817_13680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbq03021
]
D1817_13680
Transcription machinery [BR:
fbq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1817_13680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AXT20889
LinkDB
All DBs
Position
2971762..2972625
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTYAFLEQSHERPPSAEEIAKELDMTINDVKESMKNSGRHV
SMDAPLVEGEDSNLYDVLRSGESPNPDRDLLHESLRTEIERALETLTPREADVIRLYFGL
GNQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaatcaccaaacaggttaccaatagggaaaccgcatcattagacaaa
tacctacaagaaattggaaaagttgatttaattactgctgatgaagaagtagaattagca
caacgtattaaagctggcgatcaaattgctttagaaaaattaactaaagctaatttacgt
ttcgttgtatctgttgctaagcaatatcagaaccaagggctaactttacctgatttaatt
aatgaaggtaatttagggctaattaaagctgcacaacgttttgatgaaactcgaggtttt
aaatttatatcttatgctgtatggtggattcgacaatctatcttacaagcattagcagag
caatctcgtattgttagattgccattaaataaaattggttctattaataaaattaataaa
acttatgcgtttttagagcagtctcatgagcgtccgccaagtgctgaagaaattgcaaaa
gaattagacatgacgattaatgacgttaaagaatctatgaaaaattctggacgtcatgtt
tctatggatgcgcctttagtagagggtgaagattctaatctttatgatgtacttcgcagt
ggagagtctccaaaccctgatagagatttattacacgaatcattacgaacagagattgaa
cgtgctctagaaacactaacacctcgtgaagcagatgttatccgtctttattttggctta
ggaaaccaacatcctatgactctagaagagattggagaaacgtttgatttaactcgtgaa
cgtgttcgtcaaattaaagaaaaagcaattcgtagattaaaacatacgtctcgaagtaaa
atattaaaaacatatttaggttag
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