Flavobacterium branchiophilum: FBFL15_0089
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Entry
FBFL15_0089 CDS
T01625
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03030
DNA replication
fbr03410
Base excision repair
fbr03420
Nucleotide excision repair
fbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FBFL15_0089 (polA)
03410 Base excision repair
FBFL15_0089 (polA)
03420 Nucleotide excision repair
FBFL15_0089 (polA)
03440 Homologous recombination
FBFL15_0089 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbr03032
]
FBFL15_0089 (polA)
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_0089 (polA)
Enzymes [BR:
fbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FBFL15_0089 (polA)
DNA replication proteins [BR:
fbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FBFL15_0089 (polA)
DNA repair and recombination proteins [BR:
fbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FBFL15_0089 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBFL15_0089 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
CcdB
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CCB68245
UniProt:
G2Z3D2
LinkDB
All DBs
Position
97693..100527
Genome browser
AA seq
944 aa
AA seq
DB search
MDTPKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNALMDVIKREKPDHLAV
AFDKGGSDYRYEMYQEYKAHRDETPEAIKIAVPYIQELLRAMHIPIIEKAGFEADDLIGT
LAKQAEKKGYRVFMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGVPEVLSKFEISNPLQ
VIDFLGMMGDAADNIPGLPGVGEKTAKKFLAEFGSLENLLNNTDKLKGAIKTKIEANKEL
GLLSKKLATILLDCPVVFDEHDFELSKPDIEKTDALFQELEFRQMKAQFDKLYNSPLVNE
GEIEQEKTKKVVSKKTNEDQFDLFGFSDEDQTESNANTFYNSLENTAHSYQIIQGDLGLK
LLLQNLLNQKSVCFDTETTGINTLHAELVGMSFSYEKGKGFYIPFPENQTEAFELAHKLK
PFFENESIEKVGQNIKYDLKILTNYNIQVKGPLFDTMIAHYLINPDMRHNMDVLSETYLK
YSPKSIETLIGKKGKGQLSMRQVDLEAIKEYAVEDADITLQLKDNFSPILDKAETKKLFN
SIELPLISVLAAMETEGINLDVPFLKEMSVEMQKEINSFEQKIYETAGEKFNLASPKQLG
DILFDKLKIGGAKQKKTKTGQYATGEEVLSYLANEHQIVKDILEWRQMVKLQSTYIDALP
NQVDSKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRLIRKAFIARDENYTLVSA
DYSQIELRIIAALSGEENMIKAFQNNEDIHKSTAAKVFNIPLEDVTKEQRSHAKTVNFGI
IYGVSAFGLSNQTNLSRKESAELIDAYYQTYPKLKSYMSAQVDFARENGYVQTVLGRRRY
LKDINSANAVVRSAAERNAVNAPIQGSAADIIKMAMINIHQKLISENWKSKMLLQVHDEL
VFDVHKSELDKIQPMIKHEMENAFTMDVPLEVEIGIGKNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacacaccaaaacggctttttctgctcgatgcttatgctttaatctttaggggatat
tatgcttttatcaaaaatccacgaatcaattcaaaaggtcttgatacctctgctattatg
ggctttatgaatgcgttgatggacgttatcaaacgagaaaaacccgatcatttggcggta
gcttttgacaaaggtgggagtgactatcggtatgaaatgtatcaggagtacaaggcacac
cgagacgaaacacccgaagctattaaaattgcggtaccttatattcaggaattgttgcgg
gccatgcacattcctattattgaaaaagctggttttgaagctgatgatttgattggaact
ttggccaagcaagctgaaaaaaagggatatcgggtatttatggtaactcccgataaggat
tttgcccaactggtttcagaaaatatttttatgtataaacccgctcgaatgggcaacgat
attgaaatatggggggtaccagaggtgttgtctaaatttgaaattagcaatccgctgcaa
gtgattgattttttgggaatgatgggcgatgcggccgacaacattccggggctacctgga
gtgggagaaaaaacggcaaagaaatttttggccgagtttggctctctcgaaaatctattg
aacaataccgataaactaaaaggagctatcaaaactaaaattgaagcgaataaggaattg
gggcttttgtcaaaaaaactggctaccattttgctagattgtcctgtagtatttgatgag
catgattttgaactttcaaaacccgatattgaaaaaacagatgctttgtttcaggaattg
gagttccgacaaatgaaagcccagtttgataaattgtacaatagccctcttgttaatgaa
ggagagattgagcaagaaaaaaccaaaaaagtggtttctaaaaaaacaaatgaagaccaa
tttgatttgtttggcttttcagacgaagatcaaacggaatccaatgccaatacattttat
aacagccttgaaaacacggcacattcttatcaaattattcaaggtgatttagggctaaaa
ttattgctccaaaatttactgaatcaaaaatcggtttgttttgataccgaaacaactggt
attaacacccttcatgcagaattagtgggtatgtctttttcgtatgaaaaaggcaaaggt
ttttatattccatttcccgaaaatcaaacagaagcttttgaactagcccataaattgaaa
cccttttttgaaaatgaatccatcgaaaaggtgggacaaaatatcaaatatgacctgaag
attttgacaaattacaacattcaagtcaaagggcctttgtttgacacgatgattgctcat
tatttgattaatcctgatatgcgtcataatatggatgttttgagcgaaacctatttaaag
tacagtccaaaatctatcgaaacattgattggcaagaaaggaaaaggacaactatctatg
cgtcaggtagatttagaagcaataaaggaatatgctgtggaggatgcagacattactttg
caactgaaagacaattttagtcccattttagataaagccgaaactaaaaaattatttaac
agcatcgaattgccattaatttcggttttggctgctatggaaacagaaggtatcaatctt
gacgttccatttctgaaagaaatgtcggttgaaatgcaaaaagaaatcaacagttttgag
caaaaaatatatgaaactgctggcgaaaaattcaatttggcttcacccaaacagttgggc
gatatattgtttgacaaactaaaaattggaggtgccaaacaaaagaaaaccaaaacagga
caatatgctactggggaagaggttttgagttacttggcaaacgaacatcaaattgtaaaa
gacattttagaatggcgacaaatggtaaaattgcaaagcacatacattgacgcattgcct
aatcaggttgatagtaaaacaggcagagtgcacactgattatatgcaaacagtggctgcc
acgggtaggttgagttccaataacccgaatttgcaaaacattcccattcgaacagaaaga
gggcgattgattcgaaaagcctttatagcacgagacgaaaattatacgttggtttctgcc
gattattctcagattgagcttcgtattattgctgcattatcgggtgaagaaaacatgatc
aaagctttccaaaacaacgaagatattcacaaaagtactgctgccaaagtatttaatatc
cccttggaagacgttaccaaagagcaacgaagccatgccaagaccgtcaattttggtatt
atatatggggtttcggcttttggattgagcaaccaaactaatttgtctcgaaaagaaagt
gccgaattgatagacgcctattaccagacctatcctaaattgaaatcatacatgtcggca
caagtcgattttgctcgagaaaatggctacgttcaaaccgttttgggcagacgacgctat
ttgaaagacatcaattcggccaatgccgtagtaagaagtgccgccgaacgaaatgccgta
aacgcacctatacaaggaagtgccgcagatattatcaaaatggccatgatcaatattcac
caaaaattgatttcagaaaactggaaatcaaaaatgttgttgcaagtacatgatgagttg
gtttttgatgtacacaaaagcgagttagacaaaatccaaccgatgatcaaacatgaaatg
gaaaatgcctttacaatggatgtgccattagaggtagaaatcggaattgggaaaaactgg
ctggaggcccattag
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