Flavobacterium branchiophilum: FBFL15_0891
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Entry
FBFL15_0891 CDS
T01625
Symbol
uvrA1
Name
(GenBank) Excinuclease ABC, A subunit UvrA1
KO
K03701
excinuclease ABC subunit A
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FBFL15_0891 (uvrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_0891 (uvrA1)
DNA repair and recombination proteins [BR:
fbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBFL15_0891 (uvrA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FBFL15_0891 (uvrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
AAA_21
UvrA_DNA-bind
AAA_16
AAA_29
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_15
AAA_23
AAA_33
ATPase_2
AAA_25
NACHT
AAA_22
Viral_helicase1
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CCB68993
UniProt:
G2Z6Z2
LinkDB
All DBs
Position
1040201..1043008
Genome browser
AA seq
935 aa
AA seq
DB search
MKPIDFEGLDPKKNILIKGAEIHNLKSIDVAIPRNQLVVITGLSGSGKSSLAFDTLYAEG
QRRYVESLSSYARQFLGRLDKPKVTYIKGIAPAIAIEQKVNTTNARSTVGTSTEIYDYIK
LLFARIGRTFSPISGLEVQKHTVSDVVCAVKTLPLNSKWLLLAPIILEEGRKMEDKLKVL
LQQGFARVLINQEIHRLDALDAIQFSNSPIYLVVDRLVIQDDEAFFNRLSDAVQTAFFEG
KGSCILQEPDGKNSQWFSNNFEQDGMTFLEPNIHLFSFNNPYGACPTCEGYGNIIGIDEE
LVVPNTALSIFENAIFPWRGESMSWYKDELVKHAYKFDFPIHKPYFELSDTQRQLVWEGN
QYFQGLNSFFKELEEKNYKIQNRVLLSRYRGKTKCPTCKGRRLRVEASYIKINNKTVSEL
VDLPIKNLIPFFKNLKLSDFEQQVAKRLLIEINNRLSFLSQVGLDYLTLNRNSVTLSGGE
SQRINLATSLGSSLVGSMYILDEPSIGLHPKDTEKLIEVLKALKKLGNTVIVVEHDEDIM
KAADMIIDIGPEAGTLGGHLVAQGSFAEMLQSQSLTAQYLNGQKQIDIPKHRRKWKHFVE
IRGAREHNLKNIDVVLPLDALTVITGVSGSGKSTLVKKIVFPALQKALVGMGDKPGQFSE
IKGSFAHLKHIEYIDQNPIGRSSRSNPITYIKVYDDIRALFAKEKLAKLRGYEAKHFSFN
VDAGRCESCSGEGSINVEMVFMADVTLPCETCMGKRFQKEILEITFQDKNIYDILTMTVD
DAMVFFENHQQNKIVQKIKPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLVKGHTKEK
ALFVFDEPTTGLHFHDIKKLLNSFNALIENGHSIIVIEHNLDLIKCADWLIDLGPEGGEN
GGHLLAVGTPETVAQNPQSITGQYLKKILKPNKNS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattgattttgaagggcttgaccctaaaaaaaatatccttattaaaggtgcc
gaaatccataatttaaaaagtatcgatgtagccattcctcgaaatcagttggtagtcatc
acggggctttcgggttcgggcaaatcgtctttggcttttgacaccctatatgctgaagga
caacgccgttatgttgaaagtttatcgtcttatgcccgacaatttttaggcagattagac
aaaccaaaagttacctatatcaaagggatagcacctgcaattgcaatcgagcaaaaagtc
aatactaccaatgcccgttctaccgtaggaacatcgacagaaatttacgattatatcaaa
ttattatttgcaagaataggccgtactttttcgccaatttcgggtctcgaagtacaaaaa
cataccgtttcggatgtagtttgtgccgtaaaaaccttgcctcttaacagcaaatggctg
cttttggcccccatcattttagaagaaggccgaaaaatggaagacaagcttaaagtattg
ttgcaacaaggctttgcaagggtgttgatcaatcaagaaattcatcggttagacgcttta
gacgccattcaatttagtaattcacccatatatttagtagtagatagacttgtaattcag
gatgatgaggcttttttcaataggctttcggatgctgttcaaaccgctttttttgaaggt
aagggcagttgtattttacaagaacctgatggtaaaaacagccaatggtttagcaataat
tttgaacaagatggcatgacttttttagaacccaacatccatttgtttagtttcaacaat
ccgtatggagcctgtccaacgtgcgaaggatatggcaacattattggaatagacgaagag
ttggtagtgccaaataccgctttgtctatatttgaaaatgccattttcccgtggcgtggc
gaaagcatgagctggtataaggacgaactcgtaaaacatgcttataaatttgattttcct
attcataaaccttactttgaactctcagacacccaacgacaattggtttgggaaggcaat
caatattttcaagggttgaacagtttttttaaagaattagaagaaaaaaattacaaaata
caaaatcgggtgttgttgtctcgatacagaggcaaaaccaaatgccctacttgcaaaggc
agaaggcttcgggtggaggcgtcatacattaaaatcaacaacaaaacggtttcggaattg
gttgatttgcccatcaaaaatttgattccattttttaaaaatttgaaattatcagatttt
gagcagcaagtggccaaacgacttttgatagaaatcaacaacagattgtcgtttttgagt
caagtaggcttggattatttaaccctcaaccgcaactcggtgacgctttcgggtggcgaa
tcgcagcgcatcaatttggcaacctccttgggcagttcgctggtggggtctatgtatata
ctagacgaacccagcatagggctacacccaaaagacaccgaaaaattaatcgaagtttta
aaagcattaaaaaaactaggcaataccgttatagttgtagagcatgatgaagacatcatg
aaagccgccgatatgattatagatattggtccagaggctggcacccttggcgggcatcta
gtggcccaaggcagctttgcagaaatgctacaatcgcagtcgctaacagcacaatatttg
aatggacaaaagcaaattgacattccaaaacaccgacgcaaatggaaacattttgtggaa
atacggggtgccagagaacacaatttaaaaaacatcgatgtggtgttgcctctcgatgcc
ttaacggttataacaggagtttcgggttcaggaaaaagtacattggtcaaaaaaattgta
tttccagcccttcaaaaagccctagttggcatgggagacaagccagggcagttttccgaa
ataaaaggcagttttgcccatctcaaacacatcgaatatatagatcaaaaccccattggc
agaagttctcgttccaatcctattacttatatcaaagtttatgacgatattagagccttg
tttgccaaagaaaaattagccaaattgaggggctacgaagccaaacatttttcatttaat
gtagatgctggccgatgcgagagctgtagcggcgagggcagcatcaatgtagaaatggtg
tttatggccgacgttactttgccttgcgaaacctgtatgggcaaacgctttcaaaaagaa
attttagaaatcacctttcaagataaaaatatttacgacatcctaaccatgacggttgat
gatgccatggtattttttgaaaatcaccaacaaaacaaaatcgttcaaaaaatcaaaccc
cttcaggatgtaggtttgggctatgtacaacttggacaatcttcttcgaccctctctggc
ggcgaggcacaacgcatcaaattggcctcctttttagtaaaaggtcataccaaagaaaaa
gccctttttgtatttgatgagcccacaacaggattgcattttcatgacatcaaaaaattg
ttaaactcctttaatgccttaatagaaaacggacattccatcatagtaatcgaacacaat
ttggatttgatcaaatgtgccgattggctaatagaccttggtccagaaggaggcgaaaac
ggcggacacctattagccgttggcactcccgaaacggttgcccaaaacccccaatcgatc
actgggcaatatttgaaaaaaatattaaaacccaataaaaacagctaa
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