KEGG   Flavobacterium branchiophilum: FBFL15_0988
Entry
FBFL15_0988       CDS       T01625                                 
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
fbr  Flavobacterium branchiophilum
Pathway
fbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FBFL15_0988 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fbr03019]
    FBFL15_0988 (pnp)
   03016 Transfer RNA biogenesis [BR:fbr03016]
    FBFL15_0988 (pnp)
Enzymes [BR:fbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     FBFL15_0988 (pnp)
Messenger RNA biogenesis [BR:fbr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     FBFL15_0988 (pnp)
Transfer RNA biogenesis [BR:fbr03016]
 Prokaryotic type
  tRNA degradation factors
   FBFL15_0988 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: CCB69087
UniProt: G2Z7H9
LinkDB
Position
complement(1160071..1162218)
AA seq 715 aa
MIPKVSKTIIDLGDGRSISIETGKLAKQADGSVVVQMGNSMLLATVVSARQASPGIDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDSEVLTMRLVDRVLRPLFPDDYHAETQVMVQLM
SHDEEVMPDALAGLAASAALAISDIPFSTLISEVRVARIDGKLLINPSRAQLALSDIDMM
IGASKDSIAMVEGEMKEISESEMVEAIKFAHEAIKIQIEAQEKLQELVGKKDIRTYENEK
SDEAIFEKVKAAAYQKCFDIAKEGTAKHERSEKFALVKEEVKALFTEEELSENGDLVSKY
FYKVNKEAVRNVILDLGLRLDGRKTTEIRPIWAEVDYLPSVHGSAIFTRGETQALATATL
GTSREANQIDSPSEQGEEKFYLHYNFPPFSTGEAKPLRGTSRREVGHGNLAQRALKNMIP
SDCPYTIRVVSEVLESNGSSSMATVCAGTLSLLDAGIQMIKPVSGIAMGLITDGERFAVL
SDILGDEDHLGDMDFKVTGTADGITACQMDIKIEGLAYNIMEQALAQARDGRLHILGKIT
EVLATPRPDVKKHAPKIITRTIPGNFIGALIGPGGKVIQELQKATGTTIVINEVDEQGVV
EILGTDPDGIAAVLAKIDSIVFKPQLGEAYEVKVIKMLDFGAVVEYTAAPGNEVLLHVSE
LAWERTENVSDVVKMGDVFQVKYLGIDPKTRKEKVSKKALLPRPPREDKKEAPKS
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgattccaaaagtatcaaaaacaattatcgatttaggagatggacgaagcatctcaatc
gaaacaggaaaattagccaaacaagccgatggatctgtagtagtacaaatgggcaactca
atgttgctagctaccgtagtatctgcccgtcaggccagcccaggaattgattttttgcca
ttgacggtagattatcgagaaaaatttgcggcagcaggacgatttccaggtggttttttt
aagagagaagcccgtcctagtgacagcgaagttttgaccatgagattggtagatagggtt
ttgcgaccattatttccagatgattatcatgcagaaactcaagtaatggttcagttgatg
agtcacgacgaagaggtaatgccagatgcacttgctggattggccgcttcggcagcattg
gcaatatcggatattccattttcaactttaatttctgaagtacgtgtggccagaattgat
ggcaaattgcttatcaatcctagtcgtgcccaattggctttgtctgatatagacatgatg
attggagcatctaaagattctattgccatggttgaaggagaaatgaaggaaatttcagaa
tctgaaatggtagaagccatcaaatttgcacatgaagccatcaaaattcaaattgaagca
caggaaaaattacaagagctagtaggtaaaaaagacatcagaacgtatgaaaacgagaaa
tctgatgaagccatttttgaaaaagtaaaagccgcagcataccaaaaatgttttgacatt
gccaaagaaggaactgccaaacacgagcgttctgaaaaatttgctttagttaaagaagaa
gtaaaagccttatttacagaagaagaattgtctgagaatggcgatttagtttcaaaatat
ttttacaaagtaaataaagaagccgttagaaatgtcattttagatttaggtttgagattg
gacggcagaaagactacagaaatacgaccaatatgggccgaggtagattatttgccatct
gtacacggttcggccatttttacacgaggcgaaacacaagctttggcaactgccacttta
ggaacctcgagagaggccaatcaaattgattctccaagcgagcaaggagaagaaaaattt
tacttacattataacttcccaccgttttcaacaggagaagcaaaaccattaagagggaca
tcgagaagagaagtgggacatggaaatttggctcaaagagctttaaaaaacatgattcct
tcagactgcccttatactattagagtagtttctgaagtgttagagtccaatggatcgtcg
tctatggcaacggtttgcgcaggtacattatctttgttagatgctggtattcaaatgatt
aaacccgtttctgggattgcaatgggattgataacagacggagaaagatttgcagtattg
tctgatattcttggcgacgaggaccatttaggcgatatggattttaaagtaactggtaca
gctgatggtattacggcatgtcaaatggacatcaaaattgaaggtttagcatacaatatc
atggagcaagcattagcacaagctcgagatggtcgtttgcatattttaggaaaaattaca
gaagtactagcaacaccaagacccgatgttaaaaaacatgcaccaaaaatcatcacaaga
actattcctggcaactttattggagcattaattggccctggaggcaaagtaattcaggaa
ttacaaaaagcaacaggaacaactatcgtaatcaacgaagtggatgagcaaggagttgta
gaaattttgggtaccgatccagatggcattgcagcagtgttagcaaaaattgattctatt
gtatttaaaccacaacttggcgaagcttatgaagtaaaagtcattaaaatgttagacttt
ggtgcagtagtagaatatacggctgcccctggaaacgaagtccttttgcacgtatctgaa
ttggcatgggaacgtaccgaaaatgtttcggatgttgtaaaaatgggcgatgtatttcaa
gtaaaataccttggaattgaccctaaaacacgtaaagaaaaagtatctaaaaaagcactt
ttaccacgtcctccaagagaagacaaaaaagaagctccaaaatcttaa

DBGET integrated database retrieval system