Flavobacterium branchiophilum: FBFL15_1465
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Entry
FBFL15_1465 CDS
T01625
Name
(GenBank) Probable ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBFL15_1465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbr03019
]
FBFL15_1465
03009 Ribosome biogenesis [BR:
fbr03009
]
FBFL15_1465
Enzymes [BR:
fbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FBFL15_1465
Messenger RNA biogenesis [BR:
fbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FBFL15_1465
Ribosome biogenesis [BR:
fbr03009
]
Prokaryotic type
rRNA helicases
FBFL15_1465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
DUF2119
Motif
Other DBs
NCBI-ProteinID:
CCB69530
UniProt:
G2Z7P2
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All DBs
Position
1720831..1722720
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AA seq
629 aa
AA seq
DB search
MNKFEQLGLSESLQRAIIDLGFENPTEVQEKAIPLLLEKDTDLVALAQTGTGKTAAFGFP
LIQKIDANNRNTQALILSPTRELCLQITNEIKNYAKYEKGINAVAIYGGASITEQAREIK
RGAQIIVATPGRMQDMINRGLVNISQINYCVLDEADEMLNMGFYEDIVNILSTSPDEKST
WLFSATMPQEVARIAKQFMHNPLEITVGTKNSGSATVSHEFYLVNARDRYEALKRLADCN
PDIFSVVFCRTKRDTQQVAEKLIEDGYNAAALHGDLSQAQRDSVMKSFRGRQIQMLVATD
VAARGIDVDNVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKIASIERI
IKQKFEEKSIPSGIEICEIQLLHLANKIKDTEVDHEIDNYLPAINTVLEGLSKEDLIKKM
VSVEFNRFINYYKKTKDLSTQSAGNDRNREERGTRETNTNGAVRYFVNIGSRDNFDWMTL
KDWLKETLDLGRDDVFKVDVKEGFSFFNTDAEFTDRVMDVLNNTQLEGRRINVEISKNDG
GGRRDHNGRSAGGFGGSRNGGGERRSGGSGFRGAAKEGGFRNERSGAREGSFRSERGSSS
RRETTVTERAPRRSESFGTTPRARRTRRD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgaacaattaggattgagtgaatcgctacaacgtgcgattatcgatcta
ggatttgaaaatccgaccgaagtgcaggaaaaggcgattcccctattattggaaaaagac
acagatttagttgcgttggctcaaacagggacagggaaaacggcagcttttggttttccg
ctgattcaaaaaattgatgccaacaacagaaatacacaagcattgattttatcaccgaca
cgagaattatgtttgcaaattacaaacgaaattaaaaactacgccaaatacgaaaaaggt
ataaatgccgtagccatttatggaggagccagcattacagaacaagccagagaaataaaa
agaggggcacaaattattgtagctacacctggccgtatgcaagacatgattaatagagga
ttggtaaacatttctcaaattaattattgtgttttggacgaagcagacgaaatgttgaac
atgggattttatgaagatattgtaaacatcctttcgacatcgcccgacgaaaaaagtaca
tggttgttttcggcaacgatgccacaagaggtagcccgaattgcaaaacagtttatgcac
aatccacttgaaattactgttggaaccaaaaattctggttcggccacggtttcacatgag
ttttaccttgtcaatgccagagaccgttatgaagcactaaaaagattagccgattgtaat
ccagatattttttcggtagttttttgtagaaccaaaagagatacccaacaagttgccgaa
aaattgattgaagacggatacaacgccgcagcccttcatggcgatttgtcgcaagcccaa
cgtgactctgttatgaaatcgtttagaggccgacaaattcaaatgcttgttgcaacagat
gttgccgcaagaggcatagatgtggacaatgtaacacacgttgtaaattaccaacttcca
gacgaaattgaaacctacaaccaccgttctggtagaacaggaagagcaggaaaactaggt
acctctattgtaatagttaccaaaagtgaattacgaaaaattgcttctattgaaagaatt
atcaaacaaaagtttgaggaaaaaagcatcccatctggaattgaaatttgcgaaatacaa
ttgttgcatttagcaaacaaaataaaagacaccgaagtagatcatgaaatagacaattat
ttgccagctatcaacactgttttggaaggtttgtctaaagaagatttgattaaaaaaatg
gtttctgtagaatttaatcgttttattaattattacaaaaaaaccaaagatttatctaca
caatcagcaggtaacgaccgtaatagagaagaaagaggcactagagaaaccaatacaaac
ggtgcagttcgttattttgtaaacatcggatcgagagataattttgattggatgactttg
aaagattggttgaaagaaacattagaccttggcagagacgatgtatttaaagtggatgta
aaagaaggtttttcattctttaacaccgatgctgaatttacagatagagtaatggatgtt
ttgaacaatacacaattggaaggcagacgcatcaatgtggaaatttctaaaaacgacgga
ggaggcagacgtgaccataacggacgcagcgctggcggatttggtggaagccgtaatggc
ggaggcgaaagacgttcgggcggtagcggttttagaggggcggccaaagaaggtggtttt
agaaacgaaagaagcggcgctagagaaggcagctttagaagtgaaagaggtagcagctcc
cgacgtgaaactactgtaactgaaagagctccaagacgttcagaaagttttggaacaact
ccaagagccagacgtactagaagagattaa
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