Flavobacterium branchiophilum: FBFL15_1910
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Entry
FBFL15_1910 CDS
T01625
Symbol
recQ1
Name
(GenBank) ATP-dependent DNA helicase RecQ1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBFL15_1910 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbr03019
]
FBFL15_1910 (recQ1)
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_1910 (recQ1)
Enzymes [BR:
fbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBFL15_1910 (recQ1)
Messenger RNA biogenesis [BR:
fbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FBFL15_1910 (recQ1)
DNA repair and recombination proteins [BR:
fbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FBFL15_1910 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CCB69959
UniProt:
G2Z215
LinkDB
All DBs
Position
2237681..2239876
Genome browser
AA seq
731 aa
AA seq
DB search
MNSNEIDIHKELKKYFGFSQFKGLQEQVIRSLLAKNNTFVIMPTGGGKSLCYQLPALMLE
GTAIVVSPLIALMKNQVDAIRSLSSEVGVAHVLNSSLNKTEIAQVKSDIVAGKTKLLYVA
PESLTKEEYVSFLQTVPLSFVAIDEAHCISEWGHDFRPEYRNLKNIIKQLSDVPIIGLTA
TATPKVQEDILKNLDMPDAKTFKASFNRPNLFYEVRTKTKNIESDIIRFIKQNKGKSGII
YCLSRKKVESIAEVLKVNGISAVPYHAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRGGRDGGEGHCLAYYSYKDVEKLEKFLTGKPVAEQE
IGFALLQEVVAYAETSMSRRKFLLHYFGEEFDSENGEGAEMDDNVRNPKVKVEAQKEVVK
LLEIVRDTKHLYKSKEIVFTLIGRINAMIKAHRTDAQPFFGTGANKDEKYWMALLRQVLV
EGMLSKDIETYGIVKITDKGLDFIKNPHSFMMSEDHEYNQTEDDAIVTASKSTGTADEAL
MLMLRDLRKKVAKKLGLPPFVVFQDPSLEDMALKYPITLSELSNIHGVGEGKAKKYGSAF
VDLISKYVEEHDITRPDDLVVKSTGVNSANKLYIIQNIDRKLPLDDIAASKGLSMDALLK
EMEQIVNSGTKLNIKYWIDELLDEDQQEEIHEFFMESESDNIEDALKEFDGDYDLEELRL
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaacgaaattgacatccataaggaattaaaaaaatattttggctttagtcag
ttcaaaggactacaagaacaagttatcagaagtttgttggcaaaaaacaatacctttgtt
atcatgccaacaggtggcggaaaatcgttatgctatcagttacccgctttaatgcttgaa
ggcacagccattgtggtatcaccattaatcgctttgatgaaaaatcaagtagatgctatc
cgaagtttatcatcggaggtgggcgtggcacatgtgttgaactcttcattaaacaaaaca
gaaatagcacaagtaaaaagcgatattgttgctggaaaaactaaattattatatgttgct
ccagaatctttaaccaaagaagagtatgtcagttttttgcaaaccgtgccactttctttt
gtggctattgacgaagcacattgcatctcggaatggggacacgactttagaccagaatac
cgtaatttgaaaaacatcatcaaacagttaagcgatgttcctattataggattgaccgcc
acagcaacaccaaaagttcaagaagatattttgaaaaacttggatatgccagatgcgaaa
acctttaaggcttcatttaacagacccaatttgttttatgaagtgcgaacaaaaactaaa
aatattgaatctgatattattcgatttatcaaacaaaataaaggaaaatcaggtattatt
tattgtttgagtcgcaaaaaagtagaatcaattgccgaagttttaaaagtaaatggtatt
agtgccgtgccttatcatgcgggattagatgctaaaacaagggccaaacatcaagacatg
tttttgatggaagatgttgaagttgtagtggccaccattgcttttggtatgggtatagac
aaaccagacgtgcgatttgttatacatcacgacattccaaaatcattagaaagttattat
caagaaactggtagaggcggacgagatggtggcgaagggcattgtttagcctattattca
tataaagatgtagaaaaactggaaaaattcttgactggaaaacccgttgcagaacaagaa
attgggtttgcattgttacaagaagtagtggcttatgccgaaacatcgatgtctagacga
aaatttttgttgcactattttggagaggaatttgatagcgaaaatggcgaaggtgccgaa
atggacgacaatgtacggaacccaaaagtaaaagtagaagcacaaaaagaagtagtgaag
ctgcttgaaattgtaagagataccaaacatttatataaatcaaaagagattgtatttaca
ttaattggcagaatcaacgccatgatcaaagctcatagaacagatgctcaaccatttttt
ggaactggtgctaataaagatgaaaaatactggatggctttgctacgtcaggtgctggtt
gaagggatgttgtctaaagatattgaaacttatggtatagtaaaaattacggacaaaggg
ttagactttataaaaaatcctcattcgtttatgatgtctgaagatcatgaatacaatcaa
actgaagacgatgctattgtaactgcttcaaaatcaacaggtactgcagatgaagccttg
atgctgatgcttcgtgatttaagaaaaaaagtagccaaaaaattaggtttacctcctttt
gttgtatttcaagatccttcgttggaagatatggccttaaaatatcccatcactttatcg
gaattaagcaatattcatggtgttggcgaaggtaaagcaaaaaaatatggcagtgctttt
gttgatttaataagtaaatatgtagaagaacatgatattaccagaccagatgatttagtt
gtaaaatcgacgggggttaattctgcaaataaattatacatcattcaaaatattgacaga
aaactgccactagacgatattgctgcttcaaaagggctttcgatggatgctttattgaaa
gaaatggagcaaattgtaaattctggtaccaaattaaatattaaatattggatagacgaa
cttttggatgaagaccaacaagaagaaattcatgaattttttatggaatcagaatcagat
aacattgaagatgccttaaaggaatttgatggggattatgatttagaagaactgcggttg
atgcgaattaaattcatcagtgaagtagctaactaa
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