Flavobacterium branchiophilum: FBFL15_1939
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Entry
FBFL15_1939 CDS
T01625
Symbol
groL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBFL15_1939 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbr03019
]
FBFL15_1939 (groL)
03110 Chaperones and folding catalysts [BR:
fbr03110
]
FBFL15_1939 (groL)
03029 Mitochondrial biogenesis [BR:
fbr03029
]
FBFL15_1939 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fbr04147
]
FBFL15_1939 (groL)
Enzymes [BR:
fbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FBFL15_1939 (groL)
Messenger RNA biogenesis [BR:
fbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FBFL15_1939 (groL)
Chaperones and folding catalysts [BR:
fbr03110
]
Heat shock proteins
HSP60 / Chaperonin
FBFL15_1939 (groL)
Mitochondrial biogenesis [BR:
fbr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FBFL15_1939 (groL)
Exosome [BR:
fbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FBFL15_1939 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FBFL15_1939 (groL)
Exosomal proteins of breast cancer cells
FBFL15_1939 (groL)
Exosomal proteins of colorectal cancer cells
FBFL15_1939 (groL)
Exosomal proteins of bladder cancer cells
FBFL15_1939 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
NNH2
Motif
Other DBs
NCBI-ProteinID:
CCB69987
UniProt:
G2Z237
LinkDB
All DBs
Position
2270435..2272066
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPNVTKDGVTVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLKSQAKVVGSDSEKIKQIASISANNDEVIGELIATAFSKVGKEGVITVEEA
KGTDTFVDVVEGMQFDRGYLSPYFVTNPEKMEAELDNPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIEMLGTAKRVSIDKDNTTIVSGAGDADNIKNRVNQIKGQMESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAVLSHIKADNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDAPAGGMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggagttgat
gcgttagcaaatgcagtaaaagttactttgggaccaaaaggacgaaatgtaataatagga
aaatcatttggtggtccaaatgttactaaagatggtgtaacagtggccaaggaaatagaa
ttgaaagacccattagaaaatatgggagctcaaatggtaaaagaagttgcttctaaaacc
aatgatttggcaggagacggaaccactacggcaacagtattagcacaagccattgtaaaa
gaaggattgaaaaacgttgctgcgggtgccaatccaatggatttgaaaagaggtattgat
aaagccgttgaagctattgttgccgatttgaaaagtcaagcaaaagtggtgggtagcgat
tctgaaaaaatcaaacaaattgcatctatttctgccaataatgacgaagttattggagaa
ttaattgcaactgctttttcaaaagtaggtaaagaaggtgttattacggtagaagaagct
aaaggaacagacacatttgtagatgttgtcgaagggatgcagtttgacagaggatacctt
tcgccatactttgtaaccaatccagaaaaaatggaggccgaactagacaatccttatatt
ttattatatgataaaaaagtatcgtcgttaaaagaattgttgcctgttttagagccagtt
gcacaatcaggaaaacccttattgattattgcagaagatgtagatggcgaagcattatct
accttggtagtgaataaattgcgtggagctttaaaaattgctgccgtaaaagcccctggt
tttggcgatagaagaaaagccatgctagaagatattgccattttaacaggtggtacagtc
atttctgaagaaagaggctataccttagaaaataccaccattgaaatgttgggaactgca
aaaagagtgagtatcgacaaagacaacaccaccattgtgagcggtgctggagatgccgat
aacattaaaaaccgtgtgaatcaaattaaaggtcaaatggaaagcacaacctctgactac
gaccgagaaaaattgcaagagcgtttggctaaattagctggaggtgtggcggtattgtat
gtgggcgctgcttctgaagtagaaatgaaagagaaaaaagaccgtgtagatgatgccctt
catgccacacgtgctgcagtagaagaaggaattgtagctggtggaggcgttgccttgttg
agagccaaagctgttttgagccatataaaagcagacaatgccgacgaagcaacaggtatt
caaattgtatctcgagcagtagaagcacctttgagaaccattgttgaaaacgctggttta
gaaggctcggtagtagtagcaaaagtggccgaaggctcaggtgattttggatataacgcc
aaaaccgacgaatatgtggatatgctaaaagcaggaatcattgaccctaaaaaagtaact
cgtgtagctttagaaaatgccgcttcggtagctggaatgatcttaactacagaatgtgca
ttgatcgacattaaagaagatgctcctgctggtggaatgccaatgggcggtggaatgcca
ggcatgatgtaa
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