Flavobacterium branchiophilum: FBFL15_2163
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Entry
FBFL15_2163 CDS
T01625
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fbr
Flavobacterium branchiophilum
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fbr03009
]
FBFL15_2163 (trmA)
Enzymes [BR:
fbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FBFL15_2163 (trmA)
Ribosome biogenesis [BR:
fbr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FBFL15_2163 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
FtsJ
N6_N4_Mtase
Methyltransf_11
PrmA
PCMT
PabTrmU54_TRAM_dom
Methyltransf_ANTKMT
UPF0020
Motif
Other DBs
NCBI-ProteinID:
CCB70185
UniProt:
G2Z2L3
LinkDB
All DBs
Position
complement(2522684..2524099)
Genome browser
AA seq
471 aa
AA seq
DB search
MAKKQTNKIVFHQIKVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDIQTFKKRKAYYEG
KAVKFHEFSEHRTTPVCEHFGVCGGCKWQNMTYEQQLFYKQNEVLNHLQRIGKIALPDFE
PILGAQKPFFYRNKMEFGFSNARWMTEEEIQSQDTLSNKNALGFHIPKMWDKILDIHHCH
LQENPSNDIRNAIRTFAIEHDLTFFNPRLHEGFLRTLMIRTASTGEIMVLIQFFEEQTTN
RLLLLDYLAATFPDITSLQYVINGKQNDTIYDQKVHLYKGRDYILEEMEGLQFSINAKSF
YQTNSEQAYQLYQITRDFAGLTGNEIVYDLYTGTGTIAQFVSQKAKKVIGVEAVPEAIAD
AKVNAKRNNISNCDFFVGDMKVVFNEAFIAQNGQPDVIITDPPRDGMHKDVVEQILKIAP
QKVVYVSCNSATQARDLALMDEKYKVTRVRPVDMFPQTHHVENVVLLERRN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacaaacaaacaaaatagtcttccatcaaataaaagtactagatgcagga
gcaaaaggagtgtcggttgcaaaagcacccgatggtaaagtaatatttatacccaacgtc
gttcctggcgatgtggttgatattcaaacatttaaaaaaagaaaagcctattatgaaggc
aaagcagtaaaatttcatgaattttctgaacaccgcaccacgccagtttgcgaacatttt
ggagtgtgtggaggttgcaaatggcaaaacatgacatacgaacaacaattgttttataag
caaaacgaagttctaaaccatttgcaacgcattggtaaaatagcattacccgattttgaa
cccattttaggggcacaaaaaccctttttttatagaaataaaatggagtttggattttct
aatgcccgttggatgaccgaagaagaaattcaaagccaagatacgctttccaataaaaat
gcgttgggatttcatattccaaaaatgtgggataaaattttagacatccatcattgtcat
ttgcaagaaaacccttctaacgacatccgaaatgcaattcgaacctttgcaatagaacat
gatttgactttttttaacccccgacttcacgaaggttttttaagaaccttaatgatcaga
accgcttctacaggcgaaattatggttttaattcaattttttgaagagcaaaccaccaac
agattgttgcttttagattatttggccgccacttttccggacataacctcgttgcaatat
gttataaatggcaaacaaaacgacactatttacgaccaaaaagtgcatttgtacaaaggc
agagattacattttagaagaaatggaaggactacaatttagtatcaatgccaaatcattt
tatcaaaccaattcagaacaagcataccaattgtatcaaataacacgtgattttgcgggg
cttacgggcaacgaaatcgtttatgatttatatacgggtaccggtacaattgctcaattt
gtatctcaaaaagccaaaaaagtaataggagtagaggcggtgcccgaagctattgccgat
gcaaaagtaaatgccaaacgcaataatatttccaactgcgacttttttgttggcgatatg
aaagtggttttcaatgaagcctttattgctcaaaatggacaacccgatgtaataataaca
gacccccctcgagatgggatgcacaaagacgtagtggaacaaattttgaaaatagcccct
caaaaagtagtatatgtaagttgcaattcggctacacaagcccgagatttagcccttatg
gacgaaaaatacaaagtaacaagggtaagacccgtagatatgtttccgcaaacacatcat
gtagaaaacgtagtgttattagaaagacgaaattaa
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