Flavobacterium branchiophilum: FBFL15_2328
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Entry
FBFL15_2328 CDS
T01625
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fbr
Flavobacterium branchiophilum
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_2328 (sbcC)
DNA repair and recombination proteins [BR:
fbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBFL15_2328 (sbcC)
Archaeal homologous recombinant proteins
FBFL15_2328 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
DASH_Spc34
ABC_tran_CTD
Dynamin_N
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CCB70342
UniProt:
G2Z050
LinkDB
All DBs
Position
complement(2703332..2706418)
Genome browser
AA seq
1028 aa
AA seq
DB search
MIPKILKIKGLYSFTEEQTIDFSKLIEAQLFGIFGAVGSGKSTILEAISFAIFGKTERFS
TTGDDRYYNMMNLKSNETKIDFTFVAGKANKTYQSISIFKRHKTKFDEVKNQPTQFYEII
DNQQVPVEHEVILHEVGVSYNNFKRTIIIPQGKFREFLELIPSERTKMLKELFGLYKYDF
SDKTNKLQATNNHQRDTIAGHLQSFLHVNTANINQLQIDLSGVEHHFLKLKNDLSVLEEV
IHQNTILKENRSKLAALKLVFEKNAIQKKQDDSLEKEIDTFEKYQSIFNQVFVSLREVRD
HFESKQQSYNHVGAAILSKEQEIAEILPQLETLEAQNQTHESEKQKAIELDKMSEIIDLL
KTQLTLNLKNADFSKKITAIQQEIQYKQGFIQQLMESNMQLKTAIFPESMWYQLKIWYDA
LRQINQNIQKHNTEWDNLQKQQVAVKEWLQVTNFGVFEPNFAQLSEDYTYDEFEKIVAIT
QKQWQDAVYVLKDNLSKTQIKHELSVFSLHLHDGKPCLLCGATTHPNPLKPIDNHDEILD
LEQKINHLEKAIQDLWVWNQKMRQNWETTTVIQSKLLTIQNEISSLENQKTVLITQMPDP
NFAPEDEEKLIVIEKESQQNQKKLNQNLTLIDEATSALVAQQKELATAIDRWNELKLEIN
AAETTMAIKKSEVRILNVNDYSNQDKNQIIAAKNQIIAQIAQNESDLKQLLLIKYEAENE
LLILKGQLQSLEHILAEIKFEESKHNQTLQLKLAENQLDRAEVVRVLKQKWNTVEERKKI
AETRATYHKLEGEITALQKVVDTQVFDNELFEKQNTQYRAMKTDLDITNQKIGKIADNIK
TLQSQLIEKNKLEQQLHQLEIRAENLNILSKLFRANGFVEFVSKRYLKNVIALANSRFHI
MVRQKYQLEMDENGHFLVRDFLNGGKTRLLKSLSGGQIFQAALCLALALSESIQKNANID
QHFFFLDEGFGSLDKDSLQIVLETLKSLQKENRIVGLISHVEDLQQEVDVFLHIRNDASK
SSVIDTSY
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaaaatactaaaaataaaaggcttatattcatttacagaagagcaaaccatt
gatttttcaaaacttatcgaggcccaactctttggtatttttggtgctgtgggctctgga
aaatctaccattttagaagccatttcgtttgcgatttttggtaaaacagaacgtttttcg
accacgggcgacgataggtactacaacatgatgaaccttaaatccaacgaaactaaaata
gattttacctttgtagctggaaaagccaataaaacataccaatcgattagcatctttaaa
aggcataaaacaaaatttgatgaggtaaaaaaccaaccaactcaattttatgaaattata
gataaccagcaagttcccgttgaacacgaggtgatattgcacgaagttggggtttcttat
aacaattttaaacgaacaattattattccgcaaggtaagtttagagagtttttggaactg
atacctagcgaaagaaccaaaatgcttaaagaactttttggtttgtataaatacgatttt
tccgataaaacaaacaaactccaagcgaccaataaccatcaaagagacacaattgcggga
catttgcaatcgtttttgcatgtgaatacagcaaatatcaaccagcttcagatagattta
tcgggtgtagaacatcattttttgaaactcaaaaacgatttgtcagtattagaggaggtg
attcatcaaaacactatccttaaagaaaacaggtcgaaactagctgcattgaaacttgtt
tttgaaaaaaatgcaatacaaaaaaaacaagatgatagcttagaaaaggagattgacacg
tttgaaaaataccaatctattttcaatcaagtttttgtgtctttaagagaagttcgggat
cattttgaaagtaaacaacaaagttacaatcatgttggggcagctattttgagcaaggaa
caagaaatagctgaaattttgccccaattggaaacacttgaagcacagaatcaaacgcat
gaaagtgaaaaacaaaaagcaattgaacttgataaaatgtcggaaattatagatttgcta
aaaacacaattgactttgaatcttaaaaatgccgatttttccaaaaaaataacagccata
caacaggaaatccaatacaaacaaggatttatacaacaattaatggaaagcaatatgcag
ctcaaaactgccatttttccagaatcaatgtggtatcaattaaaaatttggtatgatgct
ttgaggcaaatcaatcaaaatattcaaaagcacaacaccgaatgggacaacttacaaaag
caacaagttgctgtaaaggagtggcttcaagtgactaactttggggtttttgaaccaaat
ttcgcacaactttcagaagattatacttatgatgagtttgaaaaaatagtagcaattact
caaaagcaatggcaagatgcggtttatgttttgaaagacaatctttcaaaaacacaaatc
aaacacgagttaagtgtattttctttacatttacacgacggaaaaccttgtttgttgtgt
ggtgccaccacgcatcccaatccgttgaaaccaatagacaaccatgacgaaatacttgat
ttggaacaaaaaataaaccatctcgaaaaagccatccaagatttatgggtttggaaccaa
aaaatgaggcaaaattgggaaacaacaacagttatacaatcaaaattgctgacaattcaa
aatgaaataagtagcttggaaaatcaaaaaacagttttgataactcaaatgcccgacccc
aattttgcgcctgaagacgaagaaaaattgattgttattgaaaaagaatctcagcaaaat
caaaaaaaattaaatcaaaacctaactttaattgacgaagccacgagtgctttagtagca
caacaaaaggaattggccaccgctatcgatcgttggaacgagttgaaattggaaatcaat
gccgccgaaacaaccatggctatcaaaaaatcggaagttcgtatcttaaacgtaaatgac
tattcaaaccaagataaaaaccaaattattgcagcaaaaaatcaaattattgcccaaata
gcacaaaacgaaagcgacttaaaacaattacttttaataaaatatgaagcagaaaacgaa
cttttaatattaaaagggcaattgcaaagtttggaacatattttggccgaaataaaattt
gaagaatccaaacacaaccaaacattacaactaaaattagctgaaaatcaattggatagg
gcagaagttgtacgtgttttgaaacaaaaatggaacacagttgaagaacgaaaaaaaata
gccgaaacccgagctacttatcataaacttgaaggggaaataacagcacttcaaaaagtt
gttgatactcaagtgtttgataatgaattgtttgaaaaacaaaacacccaatacagggcc
atgaaaacggatttggatataaccaatcaaaaaattggcaaaattgcggataatatcaaa
acactacaatcacagcttatcgaaaaaaacaaattagaacaacaactccatcaattggaa
atcagggccgagaatttaaacattttatcaaaactctttcgtgccaatggttttgtagaa
tttgtttcaaaacgctatctaaaaaatgttattgccttggcaaacagccgtttccatatt
atggtgcgacaaaaataccaattggaaatggacgaaaatggccattttttggttcgtgat
tttttaaacggtggcaaaacccgtttgttaaaatccctttcgggggggcaaattttccag
gccgccttgtgcttggccttagccctgtccgaaagtattcagaaaaatgccaatatcgac
cagcactttttctttttagacgaaggttttggaagtttggacaaagatagtttgcaaatt
gttttagaaacattgaaatcattgcaaaaagaaaatagaattgtagggctaatatcacac
gtagaagacttgcagcaagaggtagatgtgtttttgcacatccgcaacgacgcttcaaaa
tcgagcgttatagataccagttattaa
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