Flavobacterium branchiophilum: FBFL15_2329
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Entry
FBFL15_2329 CDS
T01625
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fbr
Flavobacterium branchiophilum
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_2329 (sbcD)
DNA repair and recombination proteins [BR:
fbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBFL15_2329 (sbcD)
Archaeal homologous recombinant proteins
FBFL15_2329 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
CCB70343
UniProt:
G2Z306
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All DBs
Position
complement(2706415..2707659)
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AA seq
414 aa
AA seq
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MGLKILHTADWHLGKKLDDFSRLEEQQLVLDEICQIADANQVDIVLIAGDLFDTFNPSAE
AQDLFYKTVHRLSKNGSRAVIAIAGNHDKPERIEAPHPLAEANGILFCGFPNTVIQPFTT
DSGMAVTRSDEGFLELKMPHNPTPFRLIFTPYANEIRLKTALNTATNEQALGDLLQQKWQ
LLAAAYCDTEGVNFLMAHLYFMKKNGPMEAEPDGEKSILHIGGAPPVFTDQIPPQIQYTA
LGHLHQYQCVDDSVAPVLYSSSPLCYSFSEAGQTKKVVIIEAECNQKATYFSVDLKQGRP
LLRRTFSAIADAVDWLLNHQNAYVELTILTENYIDGADRKQLADAHPYIIDVIPQIVGSN
DNNHLTAINPFLIDETQNMEQLFLDYFKYKHNNAEPTDALLDLLKEVIHQNDTI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaaattttgcataccgccgattggcatttaggaaaaaagttggatgatttt
tcaagattggaagaacagcaattggttttggacgaaatatgtcaaattgcagatgccaat
caagtggatatagtgttgatagcgggcgatttgtttgacacttttaacccctcggcagag
gctcaggatttgttttacaaaacggtacatcgattgtctaaaaatggttcgagggccgta
attgcaatagcgggcaaccacgacaagcccgagcgtatagaggcaccgcaccccttggca
gaagccaatggaattcttttttgtggttttccaaatacggttattcaaccttttacaaca
gattcgggcatggcggttacacggtctgacgaaggttttttggaactgaaaatgccacat
aacccaacgccttttcgactgatttttacgccttatgccaatgaaataaggctaaaaaca
gccttgaataccgctactaacgagcaagcgttgggcgatttattgcaacaaaaatggcag
ttgttggcagctgcatattgtgataccgaaggagtaaattttttgatggctcatttgtat
tttatgaaaaaaaatggcccaatggaagcagagcccgatggcgaaaagtctattttgcac
attggcggggcacctcctgtgtttacagatcaaattccgccacaaattcaatatacagcg
cttggacatttgcaccaatatcaatgtgtagatgatagcgttgcccctgttttgtatagc
tcttcgcctttgtgttatagtttttctgaggcagggcaaaccaaaaaagtagtgattata
gaagccgaatgcaaccaaaaggccacctatttttcggttgatttgaaacaagggcggcct
cttttgcgtcgaacctttagtgctattgccgatgcagtagattggttattgaaccatcaa
aatgcttatgtagaactaaccattttaaccgaaaattatatagatggtgccgacagaaag
caattggccgatgcacatccatatattatagatgttattccgcaaattgtggggagtaat
gacaataaccatttgacggccatcaacccttttttgatagacgaaacccaaaatatggaa
cagctgtttttagattattttaaatacaaacacaacaatgccgagccaacggatgcttta
ttggatttattgaaagaagttatccatcaaaacgatacaatatga
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