Firmicutes bacterium ASF500: N510_001565
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Entry
N510_001565 CDS
T10173
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs03030
DNA replication
fbs03410
Base excision repair
fbs03420
Nucleotide excision repair
fbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N510_001565 (polA)
03410 Base excision repair
N510_001565 (polA)
03420 Nucleotide excision repair
N510_001565 (polA)
03440 Homologous recombination
N510_001565 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbs03032
]
N510_001565 (polA)
03400 DNA repair and recombination proteins [BR:
fbs03400
]
N510_001565 (polA)
Enzymes [BR:
fbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N510_001565 (polA)
DNA replication proteins [BR:
fbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N510_001565 (polA)
DNA repair and recombination proteins [BR:
fbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N510_001565 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N510_001565 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
USF26635
LinkDB
All DBs
Position
complement(1628506..1631202)
Genome browser
AA seq
898 aa
AA seq
DB search
MKKLMVLDGNSIVNRAFYGINKKLSTREGQPTNAIYGFLSILNKLLKDEKPEALCVTFDR
AAPTFRHLAFEGYKANRKRMPEELASQLPILKDVLRAMNIPMYELDGWEADDLLGTIARL
DQEAGWTTVIVTGDKDALQLVTEATTVKLVSTRMGQTTYRDMTPETFREAYGFEPWSIID
LKALMGDSSDNYPGVKGVGEKTAMALIQLYRTVAHLYDHLPDICSAPDTPAKPGLIKKLE
EGRESAFQSYDLATIRADAPIDFKPEDNLCRKPDNDRLYQLFLNLEFAKLIDQYQLTAPQ
GEVTAGSDTPGALEGGCYLETEITPEHARSLLELWRTKEVVHIVALPSLDAVCVECHLND
DSWNASLLRADKLENYNEIVQTLFSDPAIKKAAHGIKNLCRILLAEGITPAGFVFDTEVA
AYLLAPADGSYELEKLGLTYYSQQFPKADLYLEEGAFGPLSDPEPPAQAMMRHSLLIDDL
RETLTARLKELGMWELYEKVDLPLCQVLAEMEAEGFLIDRGALAEFGKMLSGRIDEVQKT
IYALAGEDTFNINSTQQLGGILFDKLGLPPVKKTKTGYSTNAEVLDKLRGEHPIIDSILE
YRQLTKLKSTYVDGLGKVIGPDGRIHTSFQNTVTATGRLSSTEPNLQNIPVRTELGAELR
KMFAAPAGRVLVDADYSQIELRLLAHMAGDQAMIDGFQSGEDIHTITASQVFGVPVEEVA
PQMRRSAKAVNFGIVYGISPFSLSQDIGVTVQEAKEYMNKYFAHYAGVRAYMDGVVEQAK
QAGYVSTLWGRRRWIPEIKSSNFNTRSFGERVALNAPIQGTAADIIKLAMIRVRDRLTAE
GLEGRLVLQVHDELIVECPESEAKAVCRLVREEMEGVAALSVPLLAETNAGKTWAEAH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgatggtcctggacggcaattccattgtcaaccgggccttttatgggatc
aacaagaagctgagcacccgggagggccagcccaccaacgccatttacggctttctgagc
attttgaataagttgctgaaggacgagaagccggaggccctgtgtgtcaccttcgaccgg
gccgcgcccaccttccggcacctggcctttgagggctacaaggccaaccgcaagaggatg
cctgaggagctggccagccagctgcccattttaaaggacgtgctgcgggccatgaacatc
cccatgtatgagctggacggctgggaggccgacgacctgctgggcaccatcgcccggctg
gaccaggaggccgggtggaccaccgtcatcgtcaccggtgacaaggacgcccttcagctg
gtgactgaggccaccaccgtcaagctggtgtccacccgcatggggcagaccacctaccgg
gatatgaccccggagaccttccgggaggcgtatggcttcgagccctggagcatcattgac
ctaaaggcccttatgggggactcctccgacaactaccccggcgtcaagggggtgggggaa
aagacggctatggccctgattcagctctaccgcaccgtcgcccacctctacgaccatctt
ccggatatctgctccgccccggacacgcccgccaagcccggcctgatcaagaagctggag
gagggccgggagagcgccttccagtcctatgacctggccaccatccgcgccgacgccccc
atcgacttcaagccggaggacaacctgtgccgcaagccggacaacgaccggctgtatcag
ctcttcctgaacctggagtttgccaagctcattgaccagtatcaactcaccgcccctcag
ggggaggtaacagccggttcggacacccccggggccctggagggcggctgctatctggag
acggagatcaccccggagcacgcccggagcctgctggagctgtggcggaccaaggaggtg
gtgcatattgtcgccctcccatcccttgacgcggtctgcgtggagtgtcacctgaacgac
gattcctggaacgccagcctgcttcgggcggacaagctggaaaattacaacgaaatcgtc
cagacgctcttctccgaccccgccatcaaaaaggcggcccacgggataaaaaatctgtgc
cggatcctgctggccgaggggattacacccgccggcttcgtgttcgacaccgaggttgcc
gcttacctcctggcccccgccgacggcagctatgagctggaaaagctgggcctgacctac
tacagccagcaattccccaaggctgacctttacctggaggagggggccttcggccccctg
tccgacccggagccccccgcccaggccatgatgcgccacagcctcctgattgacgatctg
cgggaaactctcaccgcccggctcaaggagctgggcatgtgggagctgtacgagaaggtg
gacctgcccctgtgccaagtgctggccgagatggaggccgagggcttcctcatcgaccgg
ggggcgctggcagagttcggcaaaatgctgtccggccggattgacgaagtgcaaaagacc
atctacgccctggccggagaggacaccttcaacatcaactccacccaacagctggggggc
atccttttcgacaagctgggcctgcctccggtaaagaagaccaaaacgggctactccacc
aacgccgaggtgctggacaagctccggggcgagcaccccattatcgacagcattctggag
taccgccagctcaccaagctgaaatccacctatgtggacggcctgggcaaggtgatcggc
cccgacgggcggattcatacctccttccagaacaccgtcaccgccaccggacggctgtcc
tccaccgagcccaatctgcaaaacatccccgtccgcaccgagctgggggctgagctgaga
aagatgttcgccgcccccgccggtcgggtgctggtggacgccgactactcccagatcgag
ctgcgcctgctggcccatatggccggggaccaggccatgatcgacggcttccagtccggc
gaggacatccacaccatcaccgcctcccaggtcttcggcgtacctgtggaggaggtcgcc
ccccagatgcggagaagcgccaaggcggtcaatttcggcatcgtctatggtatctcaccc
ttctccctgtcccaggacatcggcgtcacggtccaggaggccaaggagtatatgaacaag
tacttcgcccactacgccggggtgcgggcctatatggacggggtggtggagcaggccaag
caggccgggtatgtgtccaccctctggggacggcggcggtggattcctgagatcaagtcc
tccaacttcaatacccgctccttcggggagcgtgtggccctcaacgcccccatccagggg
accgccgccgacatcattaagctggctatgataagggtccgggaccgcctgaccgccgaa
gggctggaaggaaggctggtcctccaggtccacgacgagctcattgtagagtgccccgag
tctgaggccaaggccgtgtgcaggctggtccgggaggagatggagggtgtggccgctctg
tccgtccccctcctggccgagaccaacgccgggaagacttgggcggaggcgcattaa
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