Firmicutes bacterium ASF500: N510_001695
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Entry
N510_001695 CDS
T10173
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N510_001695 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbs03019
]
N510_001695 (rhlE)
Enzymes [BR:
fbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N510_001695 (rhlE)
Messenger RNA biogenesis [BR:
fbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N510_001695 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Shikimate_DH
HI1480
Motif
Other DBs
NCBI-ProteinID:
USF26763
UniProt:
V2XXB6
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All DBs
Position
1743651..1745477
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AA seq
608 aa
AA seq
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MTFKDLGLNAPILRALKEQGYDKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFASPIL
QRLEPKAGPKRPIRVLILTPTRELAIQIGESFDAYGKYLKLRHAVIFGGVGQNPQVEALK
RGIDILVATPGRLMDLHDQGFVNLDGLEIFVLDEADRMLDMGFIHDVRKILKWLPQKKQT
LFFSATMPPEITDLVNSLLKNPVKVAVNPISSPVEVIRQSVYLVDKGNKTALLAHLMEEK
RVKNALVFTRTKHGANKVARDLGKAGISAAAIHGNKSQTARQQALADFKAGRIRCLVATD
IAARGLDIEELSHVFNYNLPEVPETYVHRIGRTGRAGRGGEAVAFCDFGEKPLLRDIEKL
IGKKVPLIEDHPYPMQVFEAPKRDRNGKIINEEDQEARQAARELRRQREEARQAAPQARQ
KKAEKMEPKKAELKRVEAPKEPPKRTEKESPRRGVRAGTLMDTGDAMPNTDFRRPNPLDS
DTIMDATARMLSSRRSLLSSILPKGGEKKDQKGKQAKGKQAKQVKAEEPKAEPVKQEPVK
KARRPAKGKQGTIQAAREAKPAPQKKRAASKPPRRDRRMPPEPPRKNQPKDSTEQASLMK
PYYLDIGR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttaaagacctggggctgaacgcccccatcttgcgcgccctgaaggagcagggc
tatgacaagccgtcccccattcaggaaaaagccatcccccccgccctggccgggcgggac
gtgctgggctgtgcccagacaggcaccggcaagacctgtgccttcgcctcccccattttg
cagcgcctggagcccaaagccggccccaagcgccccatccgggtcctcatcctcaccccc
acccgggagctggcgatccagatcggcgagagttttgacgcctatggcaaatacctcaag
ctgcgccacgccgtcatcttcggcggggtgggccagaatccccaggtggaggccctgaaa
agggggatcgacatcctggtggccacccccggccggctgatggacctccacgaccagggc
tttgtcaatctggacggcctggagatcttcgtgctggacgaggccgaccggatgctggac
atgggctttatccacgacgtacggaagattttgaagtggcttccccagaagaagcagacc
ctgttcttctccgccaccatgcccccggagatcaccgacctggtgaactctctgctgaaa
aacccggtaaaggtggcggtgaaccccatctcctccccggtggaggtcatccgccagagc
gtctatctggtggacaaggggaacaagaccgccctgctggcccaccttatggaggaaaag
cgggtcaagaacgccctggtattcacccgcaccaagcacggggccaacaaggtggcccgg
gacctgggcaaggcgggcatctccgccgccgccatccacggcaacaagagccagaccgcc
cgccagcaggccctggccgacttcaaagcgggccgtatccgctgcttggtcgccaccgac
atcgccgcccgtgggctggacattgaggagctgtcccacgtgttcaactacaacctgccc
gaggtgcccgagacctacgtccaccgcattggccgcaccggccgggcgggccggggcggg
gaggccgtcgccttctgcgattttggcgaaaagcctctgctccgggacattgagaagctc
atcggcaagaaggttcccctaatcgaggaccacccctaccccatgcaggtcttcgaggcc
cccaagcgggacagaaacggcaagatcatcaacgaggaggaccaggaggcccgtcaggcc
gcccgggagctccgccgccagcgggaggaggcccgtcaggccgccccccaggccaggcag
aaaaaggcggagaaaatggagcccaaaaaggcggagctgaagcgggtggaggcccccaag
gagccccccaagcggacggagaaggagtccccccggcggggcgtccgggccggaaccctc
atggacaccggcgacgctatgcccaacaccgacttccgccgccccaaccctctggacagc
gacaccatcatggacgccaccgctcggatgctgtcctcccgccggtctcttctgtcctcc
atcctgcccaagggcggggagaagaaggaccagaaggggaagcaggccaaaggcaagcag
gccaagcaggtcaaggcggaggagcccaaggcggagccggtgaagcaggagccggtaaaa
aaggccaggaggcccgccaaggggaagcaggggaccatccaggcggcgcgggaggccaag
cccgcccctcagaagaagcgcgccgcctccaagcccccccgccgggaccgccgtatgccc
ccggagcccccccggaaaaaccagcccaaggactccaccgagcaggccagcctgatgaag
ccctattatttggacatcgggcggtaa
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