Firmicutes bacterium ASF500: N510_001849
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Entry
N510_001849 CDS
T10173
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N510_001849 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbs03019
]
N510_001849 (rny)
Messenger RNA biogenesis [BR:
fbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N510_001849 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
ATP-synt_B
KH_NusA_2nd
MG280
BURP
BAAT_C
Motif
Other DBs
NCBI-ProteinID:
USF26916
LinkDB
All DBs
Position
complement(1903014..1904567)
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AA seq
517 aa
AA seq
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MDLILAVVGMIVTLIVGALGGALFGWNRRKVTAEREIKSAEDEATRIVNEAYKSAESKKR
EALVEAKEEILKAKNEHEKEVKDRRSELQRQENRLQQKEENLDRKTENIEKKEEQLSAKL
AKLDATQAEAEKLKQKQVTELERISGLTAEEARNFLLQQLEDDVTHESAMKIKEIEARFK
DEADTKAREIISLAIQRCAADHVSEATVSVVPLPNDDMKGRIIGREGRNIRTLETLTGVD
LIIDDTPEAITVSCFDPVRKEIARLALEKLILDGRIHPARIEEMVEKAKREVDMVIKSEG
ERAIFETNVHGLHPELVKLLGRMRYRTSYSQNVLNHSIEVSHLAGLLAAEIGANVTEAKR
AGLLHDLGKAIDHEVDGSHVQIGVELARKFRESENVIHAIHAHHNDVEPKTVVACLVQAA
DAISAARPGARRENLENYIKRLEALEEITSSFNGVEKSFAIQAGREVRIMVKPEVISEDQ
MVLLARDIAKKIESELQYPGQIKVHLLRETKAIEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacctaattttagcagtcgtcggcatgatcgtcacgctgattgtgggcgctctgggc
ggtgcgcttttcggctggaaccgccggaaggtcacagcggagcgggagatcaaatccgcc
gaggacgaggccacccgtattgtcaacgaggcctataagagcgccgagagcaaaaagcgc
gaggccctggtagaggccaaggaggagatcctcaaggccaagaacgagcacgagaaggag
gtcaaggaccgccgctccgagctccagcgccaggaaaaccgccttcaacagaaggaggag
aacctggaccgcaagaccgagaacatcgagaagaaggaagagcagctgtccgccaagcta
gccaagctggacgccacccaggccgaggcggagaagctgaagcagaagcaggtcaccgag
ctggagcgcatctccggccttaccgccgaggaggcccggaacttcctgctccagcagctg
gaggacgacgtgacccacgagtcggccatgaaaatcaaagagatcgaggcccgcttcaag
gacgaggccgacaccaaggcccgggagatcatctctctcgccatccagcgctgcgccgcc
gaccatgtgtcggaggccaccgtgtcggtggtgcccctgcccaacgacgacatgaagggc
cggatcattggccgggagggccggaacatccgcacgctggagaccctcaccggcgtggac
ctgattattgacgacacgccggaggccatcaccgtctcctgcttcgaccccgtccgcaag
gagatcgcccggctggccctggagaagctgatcctggatggccgcatccaccccgcccgc
attgaggagatggtggagaaggccaagcgggaggtggacatggtcatcaagtcggagggc
gagcgggccatctttgagaccaacgtccacggcctgcaccccgagctggtcaagctgctg
ggccggatgcgctaccgcaccagctacagccagaacgtgctgaaccactccatagaggtg
tcccacctggccggactgctggccgccgagatcggcgccaacgtcaccgaggccaagcgg
gccggcctgctccacgacctgggcaaggccatcgaccacgaggtggacggctcccacgtt
cagatcggcgtggagctggcccggaagttccgggagagcgagaacgtcattcacgccatc
cacgcccaccacaacgatgtggagcccaagaccgtggtggcctgcctggtgcaggcggct
gacgccatctccgcagcccggcccggcgcccggcgggagaatctggagaactatatcaag
cgcctggaggccctggaggagattacctcctccttcaacggcgtggagaagtcctttgcc
attcaggccggccgcgaggtgcggattatggtcaagcccgaggtcatcagcgaggaccag
atggtcctgctggcccgggacatcgccaagaaaatcgagtctgagctgcaataccccggc
cagatcaaggtccaccttctgcgggagaccaaggccattgaatatgccaaataa
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