KEGG   Firmicutes bacterium ASF500: N510_001849
Entry
N510_001849       CDS       T10173                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fbs  Firmicutes bacterium ASF500
Pathway
fbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N510_001849 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fbs03019]
    N510_001849 (rny)
Messenger RNA biogenesis [BR:fbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     N510_001849 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_2 ATP-synt_B KH_NusA_2nd MG280 BURP BAAT_C
Other DBs
NCBI-ProteinID: USF26916
LinkDB
Position
complement(1903014..1904567)
AA seq 517 aa
MDLILAVVGMIVTLIVGALGGALFGWNRRKVTAEREIKSAEDEATRIVNEAYKSAESKKR
EALVEAKEEILKAKNEHEKEVKDRRSELQRQENRLQQKEENLDRKTENIEKKEEQLSAKL
AKLDATQAEAEKLKQKQVTELERISGLTAEEARNFLLQQLEDDVTHESAMKIKEIEARFK
DEADTKAREIISLAIQRCAADHVSEATVSVVPLPNDDMKGRIIGREGRNIRTLETLTGVD
LIIDDTPEAITVSCFDPVRKEIARLALEKLILDGRIHPARIEEMVEKAKREVDMVIKSEG
ERAIFETNVHGLHPELVKLLGRMRYRTSYSQNVLNHSIEVSHLAGLLAAEIGANVTEAKR
AGLLHDLGKAIDHEVDGSHVQIGVELARKFRESENVIHAIHAHHNDVEPKTVVACLVQAA
DAISAARPGARRENLENYIKRLEALEEITSSFNGVEKSFAIQAGREVRIMVKPEVISEDQ
MVLLARDIAKKIESELQYPGQIKVHLLRETKAIEYAK
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggacctaattttagcagtcgtcggcatgatcgtcacgctgattgtgggcgctctgggc
ggtgcgcttttcggctggaaccgccggaaggtcacagcggagcgggagatcaaatccgcc
gaggacgaggccacccgtattgtcaacgaggcctataagagcgccgagagcaaaaagcgc
gaggccctggtagaggccaaggaggagatcctcaaggccaagaacgagcacgagaaggag
gtcaaggaccgccgctccgagctccagcgccaggaaaaccgccttcaacagaaggaggag
aacctggaccgcaagaccgagaacatcgagaagaaggaagagcagctgtccgccaagcta
gccaagctggacgccacccaggccgaggcggagaagctgaagcagaagcaggtcaccgag
ctggagcgcatctccggccttaccgccgaggaggcccggaacttcctgctccagcagctg
gaggacgacgtgacccacgagtcggccatgaaaatcaaagagatcgaggcccgcttcaag
gacgaggccgacaccaaggcccgggagatcatctctctcgccatccagcgctgcgccgcc
gaccatgtgtcggaggccaccgtgtcggtggtgcccctgcccaacgacgacatgaagggc
cggatcattggccgggagggccggaacatccgcacgctggagaccctcaccggcgtggac
ctgattattgacgacacgccggaggccatcaccgtctcctgcttcgaccccgtccgcaag
gagatcgcccggctggccctggagaagctgatcctggatggccgcatccaccccgcccgc
attgaggagatggtggagaaggccaagcgggaggtggacatggtcatcaagtcggagggc
gagcgggccatctttgagaccaacgtccacggcctgcaccccgagctggtcaagctgctg
ggccggatgcgctaccgcaccagctacagccagaacgtgctgaaccactccatagaggtg
tcccacctggccggactgctggccgccgagatcggcgccaacgtcaccgaggccaagcgg
gccggcctgctccacgacctgggcaaggccatcgaccacgaggtggacggctcccacgtt
cagatcggcgtggagctggcccggaagttccgggagagcgagaacgtcattcacgccatc
cacgcccaccacaacgatgtggagcccaagaccgtggtggcctgcctggtgcaggcggct
gacgccatctccgcagcccggcccggcgcccggcgggagaatctggagaactatatcaag
cgcctggaggccctggaggagattacctcctccttcaacggcgtggagaagtcctttgcc
attcaggccggccgcgaggtgcggattatggtcaagcccgaggtcatcagcgaggaccag
atggtcctgctggcccgggacatcgccaagaaaatcgagtctgagctgcaataccccggc
cagatcaaggtccaccttctgcgggagaccaaggccattgaatatgccaaataa

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