Firmicutes bacterium ASF500: N510_002280
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Entry
N510_002280 CDS
T10173
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs00550
Peptidoglycan biosynthesis
fbs01100
Metabolic pathways
fbs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N510_002280 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N510_002280 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fbs01011
]
N510_002280 (mrdA)
Enzymes [BR:
fbs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N510_002280 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fbs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N510_002280 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
USF27334
UniProt:
V2YI54
LinkDB
All DBs
Position
complement(2331166..2333448)
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AA seq
760 aa
AA seq
DB search
MNTKQFHRRVWAMVLLLALMITGMGAALYDLQINNGDEYYAQTQKKIAENQAVPAARGQI
LDRNGQVLVSNKVVYQVTLDLKLMGDDRNAILLDLVNIARDEGVEWADSLPISKTAPFQF
ETSLPYYTIVRDEDHNASKRLTYLGRLAVHQKWVDDPTLDPAPEEEAPAPREPSLMDKIK
SFIKGGGEPAPKPSKTPKPLLDAEGLLGKLCASYGIAGEGAVDVKEAQKTGETVPTLNIG
SMSKTDARALAGILYELYLRSTGVYQANEYVFAQDVDIDFISRVKERSLTGVIIEATTVR
QYHTQYAAHLLGRVAQMNKDEWEYYKTVDEDGDGVADYQMNSVVGKEGVEKAFESYLRGS
PGVRSVERNTKGQVVSETWLSEPEPGGNVLLTLDIGLQAYVENLLADAVPKLKSEKKEGA
ACVVLDVQTADVLAAASYPTFDLANYGQELKDKGDDPLKPFLNRAFQGAYPPGSTFKMVT
AVAGLEEEGIITPTTQIRDEGRYTYYTADGPQCWIYRQYGSKHGLVNVSKAIEVSCNYFF
FDVGRQLGIDRLIDYASRFGLAQKTGIELEERIGVMASPEYTESHGQTWYDGNTLSVAIG
QESSQFTPLQLANYIATLVNGGTRHAAHMLKEVKSSDFSQVLYDYQPQVLGTIEIEDQNL
NAVKAGMLALTKGSLSSSFGDLPFQVGAKTGSAQTGIQSDSHAVFVCFAPYDDPEIAVAM
AVEHGGSGSELANMAADVLGYYFSSQETREELPTENTLIR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaagcaatttcaccgccgggtgtgggccatggtactgcttctggccctgatg
atcaccggcatgggggccgcgctgtatgacctccagatcaacaacggcgacgaatactac
gcgcagacccaaaagaaaatcgccgagaaccaggcggtccccgccgcccgggggcagatt
ttggaccggaacggccaggtgctggtgtccaacaaggtggtctatcaggtcacgctggat
ctgaagctgatgggagacgaccgcaacgccatcctactggacctggtgaacatcgcccgg
gacgagggggtggagtgggcggacagcctgcccatctccaaaaccgcccctttccagttt
gagaccagcctgccctactacaccatcgtccgggacgaggaccacaacgcctccaaacgg
ctgacctacctgggccgtctcgcggtacatcagaagtgggtggacgaccccaccctggac
ccggcgccggaggaggaggcccccgctccccgggagcccagcctgatggacaaaatcaag
tccttcatcaagggcggcggcgagccggcccccaagccttccaagactcccaagcccctc
ctggatgccgagggcctgctcggcaagctgtgcgccagctacggcatcgccggggagggg
gcggtggatgtcaaggaggcccaaaagaccggcgagaccgtccccaccctgaacatcgga
agcatgtccaagaccgacgcccgggccctggccggaattttgtatgagctgtacctccgg
tccaccggcgtctatcaggccaacgagtatgtcttcgcccaggatgtggacatcgacttc
atttcccgggtaaaggagcgctccctcaccggcgtcattattgaggccaccaccgtccgc
cagtaccacacccagtacgccgcccacctcctgggccgggtggcccagatgaacaaggat
gagtgggaatactacaagacggtggacgaggacggggacggcgtggccgactaccagatg
aacagcgtggtgggcaaggagggggtggagaaagcctttgagtcctacctccggggctcc
cccggggtccgctcggtggagcggaacaccaaggggcaggtcgtctctgagacctggctg
tccgagccggagccgggaggcaacgtgctcctcaccctggacataggcctgcaggcctat
gtggaaaatctcctggctgacgccgtccccaagctgaaaagcgagaagaaggagggggcc
gcctgcgtggtgctggacgtgcagaccgccgacgtgctggccgcggcctcctaccccacc
ttcgacctggccaactacggccaggagctgaaggacaagggagacgaccccctaaagccc
tttttaaaccgggccttccagggggcctatcccccaggctccaccttcaagatggtcacc
gccgtggccggtctggaggaggagggcatcatcacccccaccacccagatccgggacgaa
ggccggtacacctactacaccgccgacggcccgcagtgctggatttaccggcagtacggg
agcaagcacggcctggtcaacgtgtccaaggccattgaggtctcctgcaactacttcttc
ttcgacgtaggccgtcagctgggcatcgaccggctcattgactacgcctcccgcttcggc
ctggctcagaagacaggcatcgagctggaggagcgcatcggcgtcatggcaagcccggag
tacaccgagtcccatggccagacctggtacgacggcaacaccctgtcagttgccatcggc
caggagagcagtcagttcacccccctccagctagctaactatatcgccaccctggtcaac
ggcggcacccgccacgccgcccacatgctcaaggaggtcaagtccagcgacttctcccag
gtgctctacgactaccagccccaggtgctgggcaccatcgagatcgaggaccagaacctg
aatgcggtgaaggcggggatgctggcgctgacaaagggcagcctgtccagctccttcggg
gacctgcccttccaggtgggcgccaagacgggctccgctcagaccggtatccagtccgat
tcccacgccgtctttgtctgcttcgccccctacgacgaccccgagatcgccgtagccatg
gcggtggaacacggcggcagcggctccgagctggctaatatggccgccgacgtgctgggc
tactacttctcctcccaggagacccgggaggagctccccaccgagaataccctgatccgg
taa
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