Firmicutes bacterium ASF500: N510_003387
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Entry
N510_003387 CDS
T10173
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N510_003387 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbs03019
]
N510_003387 (recQ)
03400 DNA repair and recombination proteins [BR:
fbs03400
]
N510_003387 (recQ)
Enzymes [BR:
fbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N510_003387 (recQ)
Messenger RNA biogenesis [BR:
fbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N510_003387 (recQ)
DNA repair and recombination proteins [BR:
fbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N510_003387 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RQC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
USF28426
UniProt:
V2ZEJ1
LinkDB
All DBs
Position
3462366..3464204
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AA seq
612 aa
AA seq
DB search
MDKHEVLKQYFGHSTFRQGQERLIDGILSGQDVLGVMPTGGGKSMCYQVPALLLPGLTLV
VSPLISLMKDQVAALKEAGAPAAYINSSLTGEQLRTVYSRARQGAYKLIYIAPERLEGEG
FAALAREADLSLVAVDEAHCVSQWGQDFRPSYLRIREFVDNLPRRPVLAAFTATATGQVR
EDIVQRLGLREPVREVTGFDRPNLFFDVRHPRNKMEELTRLLREREGRCGIIYCATRGGV
DRVCRALEDKGVPAARYHAGMEDGERRASQDDFQFDRRPVMVATNAFGMGIDKSNVSFVI
HYNMPKSLEAYYQEAGRAGRDGEPADCVLLYSAGDVTTARFLIENGGEELSPEDRAEVRR
RDYERLNLMVDYCKTTGCLRGYILDYFGQEHGPDCGSCGNCVGEYTQEDVTVPAQMILSC
VLRVREKLGYYVGKTLIVRTLRGSRDQRVLELGLDGLSTYGLMNKLAASRIREIMDFLEL
EGCLRLNPAHSTLEPAGEARAVLFQGKRLSMSVRKDRAEERAKEKRRTPAPAGEAPEELT
AALKAVRNRLAQREDVPAYIVFSNATLTDMAAKRPRSMEALLEVSGVGRVKAAKYGAAFL
EAIAQFEAGKKL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcatgaggttctcaagcagtatttcggccacagtaccttccgccaggggcag
gagcggctgatcgacggcattctgtccggccaggacgtgctgggcgtgatgcccaccggc
ggggggaagtccatgtgctatcaggtgcccgccctgcttctgccggggctgaccctggtg
gtgtcccccctgatctccctgatgaaggaccaggtggccgccctgaaggaggccggagcg
cccgccgcctacatcaacagctcgctgacaggggagcagctgcggacggtgtacagccgg
gcccgtcagggggcctataagctgatctacatcgccccggagcggctggagggggagggc
ttcgccgccctggcccgggaggcggacctgtccctggtggcggtggacgaggcccactgc
gtctcccagtggggtcaggacttccggcccagctatctgagaatccgggaatttgtggac
aacctgccccgccgcccggtgctggccgccttcaccgccaccgccaccggccaggtgcgg
gaggacatcgtccagcggctgggcctgcgggagccggtccgggaggtcaccggcttcgac
cggcccaacctgtttttcgacgtgcgccaccccagaaacaagatggaggagctgacccgc
ctgctccgggagcgggaggggcggtgcggcatcatctactgcgccacccggggcggagtg
gaccgggtgtgccgggcgctggaggacaagggcgtccccgccgcccgctaccacgcgggg
atggaggacggggagcggcgggccagtcaggacgacttccagttcgaccgcaggcccgtc
atggtggccaccaacgccttcggaatgggcattgacaagtccaacgtcagctttgtcatc
cactacaacatgcccaagagcctggaggcctattaccaggaggcgggccgggccggccgg
gacggcgagccggcggactgcgtgctgctctactccgccggggacgtgaccaccgcccgg
ttcctcatcgagaacggcggcgaggagctgagcccggaggaccgggccgaggtccgccgc
cgggactacgagcggctcaatctcatggtggactactgcaagaccaccggctgtctccga
ggatacattttggactacttcggccaggagcacggcccggactgcggaagctgcggcaac
tgcgtcggggagtacacccaggaggacgtgaccgtccccgcccagatgatcctgtcctgt
gtcctccgggtgcgggagaagctgggctactacgtgggcaagacgctgatcgtccgcacc
ctccggggcagtcgggaccagcgggtgctggagctggggctggacggcctgtccacctac
ggcctgatgaacaagctcgccgcctcccgcatccgggagatcatggactttttggagctg
gagggctgtctgcgcctcaacccggcccactctaccctggagccggcgggggaggcccgg
gcggtgctcttccaggggaagcggctgtccatgtccgtccggaaggaccgggcggaggag
cgggcgaaggagaagcgccggacgcccgccccggcgggagaggccccggaggagctgaca
gccgccctcaaggcggtgcggaaccgcctggcccagcgggaggacgtgcccgcctacatc
gtgttttccaacgccaccctcaccgatatggcggcaaagcgcccccggagcatggaggcc
ctgctggaggtctccggcgtgggccgggtgaaggcggcgaaatacggcgcggcctttttg
gaggccatcgcccaatttgaggcaggaaaaaaactgtaa
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