Firmicutes bacterium ASF500: N510_003420
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Entry
N510_003420 CDS
T10173
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N510_003420 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbs03021
]
N510_003420 (sigA)
Transcription machinery [BR:
fbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N510_003420 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DprA_WH
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
USF28459
LinkDB
All DBs
Position
3499340..3500644
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AA seq
434 aa
AA seq
DB search
MSTKKKEYTLEAIPEKPADIQTRMETGKIEIMKVVEGVAGAEKLSELIERGKKKGHLSSS
ELLDVLEDMELGAEQMDKIYDTLENLGIETVGEDYIPDLAETGEPPVEEMEEIAEEEIVD
PNTLIDTFGTDDPVRMYLKEIGKVNLLTPEEEVELAQAMTAGAAAQEQMDELKQSGEEIP
EEVRTELEKTIKKGEKARQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVEK
FDYVKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKVIRVSRQLLQELGHDP
TPEEIAEEMNMPAERVREILKIAQEPVSLETPIGEEEDSHLGDFIPDEDASEPAEAASFT
LLKEQLIDVLSTLTPREEKVLKLRFGIEDGRTRTLEEVGKEFNVTRERIRQIEAKALRKL
RHPSRSKKLKDFLN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaaaagaaagaatacaccctcgaggccattcctgagaagccggcggacatt
cagacccggatggagaccggaaaaattgagatcatgaaggtggtcgagggggtcgccggc
gcggaaaagctgagcgagctcattgagcgcggcaaaaagaagggccatctctcctcctcc
gagctgctggacgtgctggaggacatggagctgggcgccgagcagatggacaagatctac
gataccctggagaacctgggcattgagacggtgggggaggactacatccccgacctggcc
gagaccggcgagcccccggtggaggagatggaggagatcgccgaggaggagatcgtcgat
cccaataccctcatcgacaccttcggcaccgacgacccggtgcggatgtatttgaaggag
atcggcaaggtcaacctgctcacccccgaggaggaggtggagctggcccaggccatgacc
gccggagccgccgcacaagagcagatggacgagctgaagcagtccggggaggaaatcccg
gaggaggttcggaccgagcttgaaaaaaccatcaagaagggcgaaaaggcccgccagcgg
ctggccgaggccaacctgcgcctggtggtgtccatcgccaagcggtatgtgggccggggg
atgcagttcctggacctgattcaggagggcaacctgggcctgattaaggcggtggagaag
ttcgactatgtgaagggcttcaagttctccacctacgccacctggtggattcgccaggcc
atcacaagggccatcgccgaccaggcccggaccatccgcatccccgtccacatggtggag
accatcaacaaggtcatccgggtctcccggcagctgctccaagagctgggccacgacccc
acccccgaggagatcgctgaggagatgaacatgcccgccgagcgggtgcgggagattttg
aagatcgcccaggagcccgtctccctggagacccccatcggcgaggaggaggactcccac
ctgggggacttcatccccgacgaggacgcctccgagcccgccgaggccgcctccttcacc
ctgctgaaggagcagctcatcgacgtgctgtccaccctcacccccagggaggagaaggtg
ctcaagctccgcttcggcatcgaggatggccgcacccgcaccctggaggaggtggggaag
gaatttaacgtcacccgggagcgtatccgccagatcgaggccaaggccctcagaaagctg
cgccacccctcccggagcaagaagctgaaggactttttgaattaa
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