Flammeovirgaceae bacterium: D770_00060
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Entry
D770_00060 CDS
T04058
Name
(GenBank) helicase, RecD/TraA family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fbt
Flammeovirgaceae bacterium
Pathway
fbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D770_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbt03400
]
D770_00060
Enzymes [BR:
fbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D770_00060
DNA repair and recombination proteins [BR:
fbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D770_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
AAA_22
Herpes_Helicase
nSTAND3
Rad17
TraI_hel_assoc_N
DEAD
AAA_28
PIF1
AAA_18
HerA_C
Glyco_hydro_20
NPHP3_N
SRP54
T2SSE
Thymidylate_kin
CbiA
AAA
MeaB
AAA_12
HHH
HHH_2
UvrD_C
ABC_tran
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHM58290
UniProt:
A0A0D3L8B6
LinkDB
All DBs
Position
complement(27437..29935)
Genome browser
AA seq
832 aa
AA seq
DB search
MLKLPLNDDRSSPVLEKLSGIVKRVTFHSPESGWSVLKMTPFGREQEEVAVTVHQSKVFA
GATIDFWGEWVNHPKFGRQFKAVRVEERKPATANALEKYLGSGLIKGVGPVTAKRIVKYF
GKDTLDIFEHEIDRLTEVPGIAALKLKSISQAWKEHQEIRNVMMFLQSHGISTLFAVKIY
KTYGQQSVAVVSENPYRLSEDIYGIGFFSADRVALSLGLAPDSSARVKAAIGHVLQSARE
EGHCYLTKEQILDGVQELISLFVSDRIENELKEMEKADELKIRYLLNIKEQVVSCYYAHS
IFYDENYIAAKARKLASGKLNPNREKLQQWITGYCMQKGIQLSDEQEASILQLVTHRMGI
LTGGPGCGKTTTTRVLVALLHAMGKNVLLAAPTGRAAQRMSEVIGLEAKTIHRLLEWEPA
AGGFKRKEDNPLSCDFLIIDESSMLDVHLAAALLRAVPNQAQLLLIGDADQLPSVGAGNI
FKDLITSGVVPCARLTKVFRQAQESKIISYAHQINGGAVPKIDSPFHNPQLWAEKSDCLF
IDSEEATQEQLRFISRVKRSYIQDREEELQQAAEAEEVYLKSSELTIPPKFEHVDLEKLI
HADSHTEELQEVLKRVHPWSSLHWGYSAVDMVEKLYKDIIPKYYGTGTEIQILSPMSKGS
LGTHNLNEIIQKAVNPPGGGKVQLTLGGRTFREGDRVIQRRNNYDLNVFNGDIGRIISID
SENMMCLVAFISGQETREVAYEKEHLPELELAYAITIHKSQGSEFEVIIIPLVNQHFNML
FRNLIYTGLTRARKLAVFVGSRNALKTSVNKQNTALRQTALQWLMQHDIAPD
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaactgcctcttaacgatgaccgctcctcgcctgtgctggagaaactgtcggga
attgtgaagcgggtaacgtttcatagtcctgaatctggctggtcggtgctgaaaatgact
ccctttggcagagaacaggaagaggtagccgttacagtacaccagtcgaaagtatttgca
ggggctaccattgatttttggggcgagtgggtaaaccacccaaaatttggcaggcagttt
aaggcagtacgtgtagaagaacgcaaacctgcaacggccaacgccctggaaaaatacctg
ggctccgggctgataaagggtgtagggccggtaacagctaaaagaattgtaaagtacttc
gggaaagatacgctcgatatctttgagcatgaaattgaccggctcactgaagtaccgggc
attgctgcactaaagctaaagtctatcagccaggcctggaaggaacaccaggaaatacgc
aatgtgatgatgttcctgcagtcgcacggcatcagcaccctttttgctgtaaagatttac
aaaacctatgggcagcaatctgtggcagtggtatcagaaaatccttaccggctttcggag
gatatttatggcattggtttttttagtgccgacagggttgccttaagtttgggacttgcg
ccagattcttctgcccgggtaaaggcagccattggccatgtattgcaaagtgcccgcgag
gagggccattgctaccttacaaaagagcaaattctggatggggtacaggagctcatctct
ctctttgtatccgatcgcatagaaaatgagctgaaggaaatggaaaaagccgatgagctt
aaaatccgttacctgctcaatataaaagaacaggtagtgagctgctactatgcccactca
atcttttatgatgaaaattacattgccgccaaagcaaggaagcttgccagtggaaaactt
aatccaaacagggaaaagctacagcagtggattaccggctactgcatgcaaaagggcata
caactaagtgacgaacaggaagccagcattcttcaactggtaacccaccgtatgggtatt
ttaaccggaggaccgggctgtggcaaaaccacaaccacacgggtactggtggccctgctg
catgccatgggcaagaatgtgttgcttgcagcccctacgggacgggccgcacaacgtatg
agtgaggttataggcctggaggctaaaacaattcaccgcctgctggagtgggaaccggca
gcaggtggctttaagcgcaaagaagacaacccgcttagctgcgatttcctgattatagat
gaatcttccatgctggatgtacacctggcggcagccctgcttcgggcagtgcctaaccag
gcacagctactcctgatcggagatgcagaccagctgccttcagttggtgccggaaatatt
ttcaaagacctgattacctccggcgtggtgccctgtgcccgccttaccaaagtatttcgc
caggcacaggagtctaagatcatcagctatgcacatcagatcaatggtggggctgtgcca
aaaattgattctccctttcataacccacagctttgggcggagaaatcagactgcctgttt
attgattctgaagaagccacccaggaacaactgcgttttatatcaagagtaaaacgctcc
tacatccaggacagggaggaagagctgcagcaggcagccgaggccgaagaagtgtactta
aagagtagtgaactcaccataccgccaaaatttgagcatgtggacctggaaaagctcatc
catgccgactcccacaccgaagagctgcaggaagtgctgaagcgggtgcatccctggtct
tcactgcattggggctattcggctgtagacatggtggaaaaactgtataaggacatcata
cccaaatactatggaaccggcactgaaatacagattctctccccgatgagcaagggtagc
cttggcacccataacctcaatgagattattcagaaagctgtaaaccctcccggcggtggc
aaagtacagctaacgttgggaggccgcaccttcagggagggagaccgtgttattcagcgc
cgcaataactacgatctcaatgtattcaatggtgatattggccgcatcatcagcattgac
agtgaaaatatgatgtgcctggtggcttttatttcagggcaggaaaccagggaagtggct
tatgagaaagagcacctgccggagctggagctggcctatgccattacgattcataaatca
caaggcagtgaatttgaggtgatcattattcccttggtaaaccagcacttcaatatgctc
ttccgcaacctgatctataccggcttaacccgtgccaggaagctggcagtatttgtaggg
agccgcaatgcacttaaaacatccgtgaataaacagaacaccgccctgcgccaaaccgcc
ctgcagtggctcatgcagcacgatattgccccagattaa
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