Flammeovirgaceae bacterium: D770_01460
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Entry
D770_01460 CDS
T04058
Name
(GenBank) RNA polymerase, sigma 70 subunit, rpod subfamily protein
KO
K03086
RNA polymerase primary sigma factor
Organism
fbt
Flammeovirgaceae bacterium
Pathway
fbt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D770_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbt03021
]
D770_01460
Transcription machinery [BR:
fbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D770_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
UPF0122
Sigma70_r4_2
DUF6285
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHM58566
LinkDB
All DBs
Position
382225..383088
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AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVELAKRIRSGDQMALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKFEREPSPEELAESLEVSTNEVVDTMRISGRHV
SMDAPFVQGEENSLLDVLENDMEETPDAELMNDSLRREVQRALSTLTQREADVIALYFGL
NGEHSMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttaagatcagcaaacagattaccaaccgcgaaagccagtcgctggacaag
tatctgcaggagatcggtaaggtagacttgctgacacccgatgaggaagtggagttagcg
aaacgcattcgctccggcgatcagatggccctggagaaattaaccaaagccaacctgcgt
ttcgtagtttccgttgccaagcagtaccagaaccaggggctttctttaggagaccttatc
aacgaaggtaatctaggattgatcaaagccgctcagcgctttgacgaaacccgtggcttt
aaatttatttcttatgccgtatggtggattcgtcagtctattctgcaggcattggctgaa
cagtcccgtattgttcgccttccgctaaaccgtgtaggttcactgaataaaatctccaag
actttttctgagctggagcaaaagtttgagcgtgagccatcaccagaggaattagccgaa
agcctggaagtttctaccaatgaagtagtagacaccatgcgtatctccggccgccatgtt
tctatggatgctccttttgttcagggcgaagaaaatagcctgctggatgtgctggaaaat
gacatggaagaaactccggacgcggagctgatgaacgactcacttcgtagggaagtacag
cgtgcactttctacccttacccagcgtgaagcagatgtaattgccctctattttggcctg
aatggcgaacacagcatgacgctggaggaaataggagagaagtttaacctgacacgcgag
cgtgtgcgtcagatcaaagaaaaagcaatacgccgcctgcgccatacaagtcgcagtaaa
gcgttaaaaccttacctgggctga
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