Flammeovirgaceae bacterium: D770_03040
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Entry
D770_03040 CDS
T04058
Name
(GenBank) ATP-dependent RNA helicase
Organism
fbt
Flammeovirgaceae bacterium
Pathway
fbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D770_03040
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
AAA_30
NAT10_TcmA_helicase
CMS1
ERCC3_RAD25_C
NNH1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHM58875
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Position
complement(771823..772935)
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AA seq
370 aa
AA seq
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MATFKDLGVSDTFIKALQENNIESPTEIQEKVIPLLLKKGTDLVAQAQTGTGKTAAFGLP
LLQTLDPENSKVQALVLAPTRELCQQIAKQLFRFTKYGPKIFSEAVYGGAPIGDQIKALM
RPTQIVVATPGRLIDLLDREAVDLTQVKILVLDEADEMLSMGFKKELELVMKKASGKHST
WLFSATMPPDIRAIISNYMSPQAQKVQIDKQNVVNKDIEHRYILCDGKDKPRILLNFLQD
QGESRGLVFCKTKNQAQTLAKQLTAKNYPADALHGDLQQRERDKVMRAFTNRMEFSTLIA
TDIAARGLDIDDLAYVVHFDLPDQLEYYTHRSGRTARAGKKGLSVALVTQAQMKDLRAIE
NSLGIKMNEM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttggctactttcaaagatttaggcgtttctgatacattcatcaaagcattgcaggagaat
aatatcgaatctcctacagaaatacaggaaaaagtaattccccttttgctgaaaaagggt
accgacctggttgcgcaggcccagacaggtactggtaaaactgccgctttcgggctgccc
ctgttgcagacgctggatccggaaaacagcaaggtgcaggccctggtactggcacctaca
cgtgaattatgtcagcagattgcaaagcaactgttcagattcactaagtacgggcctaaa
atattttcagaggctgtatacgggggtgctcctattggagatcagataaaggccctgatg
cggccaacgcaaattgtggtggctacacccggaaggctgatagacctgctggaccgcgaa
gcagtggatctgacacaggtaaaaattctggtgttggacgaggccgatgaaatgcttagc
atgggttttaaaaaagagcttgagctggtcatgaaaaaagcatctggcaaacattctacc
tggttgttttctgccaccatgcctcccgatatccgggcaatcatcagcaattatatgtcg
ccccaggcacaaaaggtgcagattgataaacagaatgtagtgaacaaagatattgagcat
cgctacattttatgcgacggtaaagacaagcccaggatactcctgaattttctgcaggac
cagggcgaaagcagaggcctcgttttctgcaaaaccaaaaaccaggcccagacactggct
aagcaactgactgctaaaaattatccggccgatgcactgcacggagatctgcagcagcgg
gagcgggataaagtgatgcgtgcctttacaaaccgtatggaattttctaccctcattgct
acagatattgcagcaaggggtcttgatattgatgaccttgcctatgtagtacattttgat
ttgccagatcagctggaatattatacccatcgcagtggccgtacagcccgtgcaggcaaa
aaaggattgtctgtagccctggtaacacaggcacaaatgaaagatctaagagctatcgaa
aacagtctggggatcaaaatgaatgagatgtaa
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