Flammeovirgaceae bacterium: D770_03500
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Entry
D770_03500 CDS
T04058
Name
(GenBank) chaperonin groel
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fbt
Flammeovirgaceae bacterium
Pathway
fbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D770_03500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbt03019
]
D770_03500
03110 Chaperones and folding catalysts [BR:
fbt03110
]
D770_03500
03029 Mitochondrial biogenesis [BR:
fbt03029
]
D770_03500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fbt04147
]
D770_03500
Enzymes [BR:
fbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D770_03500
Messenger RNA biogenesis [BR:
fbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D770_03500
Chaperones and folding catalysts [BR:
fbt03110
]
Heat shock proteins
HSP60 / Chaperonin
D770_03500
Mitochondrial biogenesis [BR:
fbt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D770_03500
Exosome [BR:
fbt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D770_03500
Exosomal proteins of other body fluids (saliva and urine)
D770_03500
Exosomal proteins of breast cancer cells
D770_03500
Exosomal proteins of colorectal cancer cells
D770_03500
Exosomal proteins of bladder cancer cells
D770_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
AHM58967
LinkDB
All DBs
Position
888193..889833
Genome browser
AA seq
546 aa
AA seq
DB search
MSKKINFDIEARDKLKRGVDALANAVKVTLGPKGRNVIIDKKFGAPTVTKDGVSVAKEIE
LKDPIENMGAQLVKEVASKTADDAGDGTTTATVLAQAIYTHGLKNVTAGANPMDLKRGID
KAVEAVVNHLKQQSKTISSSNEIAQVGTISANNDREIGQMIADAMDKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFVTNADKMIADLDNPFILIYDKKISSMKELLPILEQVV
QTGKPLLIISEDVDGEALATLVVNKIRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEERGYKLENATLEYLGTAEKITIDKDNTTIVNGAGSPDDIKARVNQIKSQMDTTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVQEGVVAGGGIAFIR
AVEALENLQVDNEDQSTGVNIVRLSLEAPLRTIVSNSGREGSVVIQKVREGQGDFGYNAR
EDKYENMFAAGVIDPTKVTRLALENAASIASLLLTTECVVADDPEDEKGGGAGMPGGMPG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaaattaattttgatatcgaagcccgcgacaaattgaaaagaggggttgat
gcccttgccaacgcggttaaagtaactttaggccctaaaggccgcaacgtgatcatcgac
aaaaaattcggtgcccctaccgtaaccaaagacggtgtttctgttgctaaagaaattgag
ctgaaagaccctattgaaaacatgggtgcacagctggtaaaagaagttgcttctaaaact
gccgacgatgctggtgacggtaccactactgccactgttcttgctcaggccatttacacc
cacggcctcaagaacgtaactgccggtgccaacccaatggacctgaaacgcggtatcgac
aaagccgtggaagcagttgttaatcacctgaaacagcaaagcaaaaccatcagcagctct
aacgagattgcacaggttggtaccatttctgccaacaacgatcgtgaaattggccagatg
attgccgatgccatggataaagtaggcaaagacggtgtaattactgtagaagaagcaaag
ggtaccgaaaccgaagtgaaaactgtagaaggtatgcagtttgaccgcggttacctgtcg
ccttactttgttaccaatgcagataaaatgattgccgatctggacaatccttttatcctg
atctacgacaagaagatcagcagcatgaaagaactgcttccaattctggagcaggtggta
caaacaggcaaacctctgctgatcatctctgaagatgtagacggcgaagcgctggccacc
ctggtagtaaataaaatccgcggtgccctgaaaatcgcagctgtgaaagcccctggtttt
ggtgatcgtcgtaaggcaatgctggaagacattgccatcctgacaggtggtactgtgatt
tctgaagagcgtggttacaaactggagaatgctaccctggaatacctgggtactgccgaa
aaaatcacaatcgacaaagacaatacaaccattgtgaatggtgctggtagcccggacgat
atcaaagcccgcgtaaaccagatcaaatcacaaatggatactactacttctgattacgac
cgcgaaaaactgcaggaacgtcttgccaagttaagcggtggtgtagccatcctttatatt
ggtgctgctaccgaagtagaaatgaaagagaagaaagaccgcgtagatgatgctctgcat
gcaactcgcgctgctgtacaggaaggtgttgttgccggtggtggtattgcctttatccgt
gccgtagaagcgctggaaaacctgcaggtagataatgaagatcagtctaccggtgtgaat
attgtacgcctgtcgcttgaggctccgctgcgtactatcgttagcaattcaggcagagaa
ggtagcgtagtaattcagaaagtacgcgaaggacaaggcgactttggttacaatgcccgc
gaagataaatatgagaacatgtttgctgccggtgtaattgatccaaccaaggttacccgt
cttgcccttgaaaatgctgcttctatcgcttccctgctgcttactaccgagtgtgtggtt
gcagacgatccggaagatgaaaaaggtggcggtgccggaatgccaggcggtatgccgggc
ggcatgggcggcatgatgtaa
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