Flammeovirgaceae bacterium: D770_08040
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Entry
D770_08040 CDS
T04058
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fbt
Flammeovirgaceae bacterium
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fbt03016
]
D770_08040
Enzymes [BR:
fbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D770_08040
Transfer RNA biogenesis [BR:
fbt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D770_08040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHM59871
UniProt:
A0A0D3LCT1
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All DBs
Position
complement(1891790..1892461)
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AA seq
223 aa
AA seq
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MFKQEVTKEEINELPLIRYEGKVEVVTTEEELAEALVDLRRQPVLGFDTESRPSFRKGEY
YPISLVQIATPGLVYLIRTNKTGFSSGLRALFETPTVIKAGISILDDLRELQKLASFKPG
GIIELNQVAQAAGIKNIGVRSLSAIIMGIRISKSQQTSNWERDTLSKSQIYYAATDAWVC
LQLYEKLERWGYIQPGEHLFQMPAPAKPKFRPNGRSFGERDSF
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcaagaggttacaaaagaagagataaacgaactgccccttattcgctatgaa
ggtaaggtagaggtggtgacgacggaggaggagctggcagaagcgctggttgatcttcgc
cgtcagccggtgctgggcttcgataccgaaagccggccttcgttccgcaaaggtgagtat
tatccgatatcactggtgcagatagccaccccgggattggtatacctgatcagaacaaac
aaaacaggcttttcctcgggcttaagagccctttttgaaacaccaaccgttatcaaggcc
gggatttctatcctggatgatttacgggaattgcaaaagctggcgagttttaagccaggt
ggcattatagaactgaatcaggtagcccaggcagccggtattaaaaacattggtgtgcgc
agtctttctgccatcatcatgggtatccggatcagtaaaagccagcaaacctctaactgg
gagcgcgataccctaagcaagagccagatctattatgccgccaccgatgcctgggtatgt
ctgcagctctatgaaaagctggaacgctggggttatatccagcccggagaacaccttttc
cagatgcctgctccggcaaaaccaaagttcaggccaaacggcagatcctttggtgaacgt
gatagcttttag
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