Flammeovirgaceae bacterium: D770_08420
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Entry
D770_08420 CDS
T04058
Name
(GenBank) RNAse z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fbt
Flammeovirgaceae bacterium
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fbt03016
]
D770_08420
Enzymes [BR:
fbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
D770_08420
Transfer RNA biogenesis [BR:
fbt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
D770_08420
Prokaryotic type
D770_08420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AHM59947
UniProt:
A0A0D3LE14
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All DBs
Position
1981487..1982407
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AA seq
306 aa
AA seq
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MAFQVKILGSNSATPAHNRNQTSQLLIAENEYYLIDCGEGTQMQLIRYRIRFHKISCIFI
SHLHGDHYLGLMGLLLTMHLQGREHELHVFGPAGLDEIITIQLKHSGTVLSYKVHFTTVD
PANPNLIFESKLLRVHSIPLVHRIPCAGFIFSEKPKSRRFNKAKLQEDMTGDDITLLKQG
QDIYTADGALRYRCIDYTLPPRRSRSYAYCSDTRYEPGIIPLIKGVDVLYHESTFTQEFE
ERAAATHHSTARQAALIAREANASKLLLGHYSVRYKDLTPLLAEARQVFYNSQLALEGET
IDIGEE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggcctttcaggttaaaatactggggtctaactctgccacacctgcccataacaggaac
cagacctcacaactactgatcgcagaaaacgagtactacctgatcgattgtggagaaggt
acccagatgcagctcatacgctaccggatacgcttccataaaatcagctgtatctttatc
agccatttgcacggcgatcattacctgggactaatgggcctgctgctcaccatgcacctg
caggggcgcgaacatgaattacatgtttttggccctgcaggcctggatgagattattacc
atacagttaaagcacagcggtactgtgctgagctataaggtccactttacaaccgtggat
cctgccaatcctaaccttatttttgaaagtaaactgctaagggtacactccatccccctg
gtgcaccgcattccctgtgccggatttattttcagtgaaaagcccaaatcgcgccgtttt
aacaaagcaaagctgcaggaggatatgacgggcgacgatattacactactcaaacagggc
caggatatatacaccgccgatggggcgctacgctaccgctgtattgactataccctgccg
ccacgccgctcccgctcctatgcctattgctcagatacccgttatgagcccggtattatt
ccgctcatcaaaggggtggatgtactataccatgagtctacctttacccaggaatttgaa
gaaagggctgccgcaacccaccactctacagcccggcaggctgccctgattgcccgggag
gctaacgccagcaagctgctgctgggccattattctgtacgttataaagacctgacgccc
ctgctggccgaagcccgccaggtgttttataattcccaacttgcgctggaaggagaaacc
atcgatattggggaggaatga
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