Flammeovirgaceae bacterium: D770_09565
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Entry
D770_09565 CDS
T04058
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fbt
Flammeovirgaceae bacterium
Pathway
fbt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D770_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbt03021
]
D770_09565
03400 DNA repair and recombination proteins [BR:
fbt03400
]
D770_09565
Enzymes [BR:
fbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D770_09565
Transcription machinery [BR:
fbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D770_09565
DNA repair and recombination proteins [BR:
fbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D770_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AHM60170
UniProt:
A0A0D3LDT4
LinkDB
All DBs
Position
complement(2243267..2244256)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVAMEKADDFRGLFTFKPLEPGYGVTIGNALRRILLSSLEGYAIVGIKIP
GVLHEFSSIEGVVEDVSDIILNLKQVRFKKIAEIVDNQFTVHVKNQKQLKAGQLVNAQKG
FQVLNPELVIFNSDESVDLEIEVYVEKGRGYVPADENKPSEQAFGYIATDAIFTPIKNVQ
YRIENTRVEQKTDYEQLVLDIETDGSVHPEKALQGAANILIQHFMLFSDQNMVLESGAQG
EPEAVDEEMLHMRKMLKTPLNDLDLSVRAYNCLKAADVRTLGDLVMLEISDMMKFRNFGK
KSLAELEQLVQEKGLVFGMDISKYKLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctatactagcatttcagatgcccgaaaaggttgccatggaaaaggcagacgacttt
cgcggtctgtttaccttcaaaccactggaaccaggctacggtgtgacaatcggaaatgcg
ctgcgcaggattctactgtcatcgctggaagggtatgctattgttggtataaagattcct
ggcgtactgcatgaattttcctctatagagggagtagtggaagatgtgagcgatattatt
cttaacctgaaacaggttcgcttcaagaaaatagctgaaatcgtagacaaccagtttacg
gtacacgtgaaaaatcagaagcagctgaaagcaggtcagctggtaaatgctcaaaaaggc
tttcaggtgttaaaccctgagctggtcatcttcaactccgacgaatctgtagatctggaa
atagaagtgtatgttgagaaaggccgcggctatgttccggctgacgaaaacaaaccttct
gagcaggcttttggctacatagccactgatgccatctttactccgatcaaaaatgtacag
taccgcattgagaatacccgcgtagagcagaaaactgactacgaacaactggtactggat
attgaaactgatggctctgttcatcctgagaaagcacttcagggcgctgccaacatcctt
attcagcactttatgttgttctctgaccagaacatggtgctggagtccggagcacaggga
gagccagaggcagtcgatgaggaaatgctgcacatgcgtaagatgctgaagacaccactg
aacgatcttgatctgtcagttcgtgcctataactgcctgaaagcagcagacgttcgcaca
ctaggagatcttgttatgcttgagatctctgatatgatgaaattccgcaacttcggtaag
aagtcgctggccgaactagaacagcttgtacaagaaaaaggtctggtattcggtatggat
atatccaagtacaaacttgatgaggactaa
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