Flammeovirgaceae bacterium: D770_16360
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Entry
D770_16360 CDS
T04058
Name
(GenBank) ribonuclease, rne/rng family protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fbt
Flammeovirgaceae bacterium
Brite
KEGG Orthology (KO) [BR:
fbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbt03019
]
D770_16360
03009 Ribosome biogenesis [BR:
fbt03009
]
D770_16360
Messenger RNA biogenesis [BR:
fbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D770_16360
Ribosome biogenesis [BR:
fbt03009
]
Prokaryotic type
rRNA processing factors
D770_16360
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
RNase_E_G_Thio
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHM61526
UniProt:
A0A0D3LHE5
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Position
complement(3908320..3909900)
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AA seq
526 aa
AA seq
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MSYELLINSTQDGSRIALLKDKGLVEFHLEHDESRFTVGDIYLGTVRKVSQGLNAAFIDI
GYEKDGFLHYLDLGPRVQSLNKFTKLVQQGKLAGGPQNGKLASFKLEPEIDKHGKIGQVL
SKNQQILVQVVKEPISTKGPRLSCELSIAGRYLILVPFSDSINVSKKIGNSEERQRLMRL
ITSIRPEGFGVIIRTVAEGKEVAQLDRDLEELVNKWENGIKKLRTAKPREKIIGEMNRAS
SILRDVLNESFDSIITDDEEMFSDIKDYIRSIAPDKQKIVKLHNGKVKPFEQYGIEKQLK
SLFGQTVSLQGGGYLVIEHTEALHVIDVNSGNKSNSAEDQESTALQVNLQAAKEVARQLR
LRDMGGIIVVDFIDMRKPDNKRKVYDAVKDEMKDDRSKFTILPLTKFGLMQITRQRVRPE
LNIATREKCPTCNGTGKITASILVSDEIENHLDFLMTRQNERSIKLALHPYLYSYFTNGI
ISKRMKWFMKYNRWVNLEQDSSLGVTDFRFMNGKDEVIEIVPKQIS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacgaactgttaatcaattctactcaggatggtagccgtatagccctcttaaaa
gacaaaggccttgttgagtttcatctggagcacgacgaaagtcggtttaccgtaggtgat
atttatctcggtacggtacgtaaagtatctcaggggctcaacgcagcgttcattgacatt
gggtacgaaaaagacggatttctgcactacctcgatttggggccgagggtgcagtcatta
aacaagtttaccaagctggtacagcagggtaaactcgcgggtggtccgcaaaatggaaaa
ctggcaagctttaagctggagcctgaaattgacaaacacggcaagatcggccaggtactt
agcaagaatcagcagattctggtacaggtagtaaaagagccaatctcaaccaaaggcccc
cgcctttcctgcgaactctctatagctggccgttaccttattctggtgcctttttctgat
agcattaatgtatcgaaaaagatcggcaactctgaagagcgccagcggctcatgcgcctg
attacctccatcagacctgaagggtttggggtaattattcgcacggtagcagaaggcaag
gaagttgctcagcttgaccgcgatcttgaagaacttgttaacaagtgggagaacggaatc
aaaaaattgcgcactgccaaacccagggaaaagattattggcgaaatgaaccgcgcctcc
tctattctcagagatgtgcttaacgaaagctttgattccatcattaccgacgatgaggag
atgttttctgacattaaggattacatccgctccattgcgccagacaagcaaaagatcgta
aaactccacaatggtaaggttaaaccctttgaacaatacggaatcgaaaaacagctaaaa
agccttttcggtcaaaccgttagtcttcagggtggtggttatctcgttattgaacatacc
gaagccttgcacgtgattgatgttaacagcggaaacaagtctaattccgccgaagaccag
gaaagcacagccctgcaggttaatttacaggcagcaaaagaagtagcacggcagctacgt
ttgcgcgatatgggtggcattattgtagtcgattttatcgatatgcgtaagcccgataat
aagcgcaaggtttatgatgcggttaaagacgaaatgaaagacgaccgctctaaatttacc
atactgccgcttaccaagtttggcctcatgcaaattacccggcaacgggtacggcctgag
ctgaacattgctacacgagaaaaatgccccacctgtaatggaacaggcaaaataacagct
tccattctggtatctgacgaaattgaaaaccatctggacttcctcatgacccgccagaac
gagcgcagcatcaagcttgccctgcatccgtatctctattcttactttaccaatggaatt
atttccaagcggatgaagtggtttatgaagtacaaccgctgggtaaacctggagcaggac
tcctctcttggtgtaaccgatttccggttcatgaatggaaaagatgaagttattgagata
gtacccaagcaaataagctaa
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